Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DDX47Q9H0S4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.24■□□□□ 0.99
DDX47Q9H0S4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DDX47Q9H0S4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX47Q9H0S4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.24■□□□□ 0.99
DDX47Q9H0S4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX47Q9H0S4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.24■□□□□ 0.99
DDX47Q9H0S4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.24■□□□□ 0.99
DDX47Q9H0S4 AP001330.3-201ENST00000520123 633 ntBASIC21.24■□□□□ 0.99
DDX47Q9H0S4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
DDX47Q9H0S4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DDX47Q9H0S4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DDX47Q9H0S4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX47Q9H0S4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DDX47Q9H0S4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
DDX47Q9H0S4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
DDX47Q9H0S4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
DDX47Q9H0S4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.24■□□□□ 0.99
DDX47Q9H0S4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX47Q9H0S4 AL158211.5-201ENST00000623583 2518 ntBASIC21.23■□□□□ 0.99
DDX47Q9H0S4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX47Q9H0S4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX47Q9H0S4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX47Q9H0S4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.23■□□□□ 0.99
DDX47Q9H0S4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
DDX47Q9H0S4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
DDX47Q9H0S4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.23■□□□□ 0.99
DDX47Q9H0S4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.23■□□□□ 0.99
DDX47Q9H0S4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
DDX47Q9H0S4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DDX47Q9H0S4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX47Q9H0S4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
DDX47Q9H0S4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
DDX47Q9H0S4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
DDX47Q9H0S4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DDX47Q9H0S4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.22■□□□□ 0.99
DDX47Q9H0S4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX47Q9H0S4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX47Q9H0S4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DDX47Q9H0S4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
DDX47Q9H0S4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.22■□□□□ 0.99
DDX47Q9H0S4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.22■□□□□ 0.99
DDX47Q9H0S4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX47Q9H0S4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.22■□□□□ 0.99
DDX47Q9H0S4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX47Q9H0S4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
DDX47Q9H0S4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DDX47Q9H0S4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDX47Q9H0S4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
DDX47Q9H0S4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDX47Q9H0S4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.21■□□□□ 0.99
DDX47Q9H0S4 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
DDX47Q9H0S4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
DDX47Q9H0S4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
DDX47Q9H0S4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
DDX47Q9H0S4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
DDX47Q9H0S4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.21■□□□□ 0.99
DDX47Q9H0S4 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.21■□□□□ 0.99
DDX47Q9H0S4 PBX2P1-201ENST00000493219 1291 ntBASIC21.21■□□□□ 0.99
DDX47Q9H0S4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.21■□□□□ 0.99
DDX47Q9H0S4 TPRG1LP1-201ENST00000598702 760 ntBASIC21.21■□□□□ 0.99
DDX47Q9H0S4 AC008175.2-201ENST00000612840 297 ntBASIC21.21■□□□□ 0.99
DDX47Q9H0S4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.21■□□□□ 0.99
DDX47Q9H0S4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
DDX47Q9H0S4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
DDX47Q9H0S4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.21■□□□□ 0.99
DDX47Q9H0S4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
DDX47Q9H0S4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
DDX47Q9H0S4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX47Q9H0S4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX47Q9H0S4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DDX47Q9H0S4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
DDX47Q9H0S4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.2■□□□□ 0.98
DDX47Q9H0S4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DDX47Q9H0S4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX47Q9H0S4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX47Q9H0S4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DDX47Q9H0S4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
DDX47Q9H0S4 POU5F1P4-201ENST00000413175 1085 ntBASIC21.2■□□□□ 0.98
DDX47Q9H0S4 AC096631.2-201ENST00000436136 790 ntBASIC21.2■□□□□ 0.98
DDX47Q9H0S4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.2■□□□□ 0.98
DDX47Q9H0S4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.2■□□□□ 0.98
DDX47Q9H0S4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.2■□□□□ 0.98
DDX47Q9H0S4 AC012414.1-201ENST00000556676 535 ntBASIC21.2■□□□□ 0.98
DDX47Q9H0S4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.2■□□□□ 0.98
DDX47Q9H0S4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX47Q9H0S4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
DDX47Q9H0S4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
DDX47Q9H0S4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX47Q9H0S4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX47Q9H0S4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DDX47Q9H0S4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX47Q9H0S4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX47Q9H0S4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.19■□□□□ 0.98
DDX47Q9H0S4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX47Q9H0S4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX47Q9H0S4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DDX47Q9H0S4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DDX47Q9H0S4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.19■□□□□ 0.98
DDX47Q9H0S4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms