Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.31■■□□□ 1
TRIM62Q9BVG3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRIM62Q9BVG3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM62Q9BVG3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM62Q9BVG3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.3■■□□□ 1
TRIM62Q9BVG3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
TRIM62Q9BVG3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM62Q9BVG3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
TRIM62Q9BVG3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRIM62Q9BVG3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TRIM62Q9BVG3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.3■■□□□ 1
TRIM62Q9BVG3 AL138781.1-201ENST00000566567 1274 ntBASIC21.3■■□□□ 1
TRIM62Q9BVG3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.3■■□□□ 1
TRIM62Q9BVG3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM62Q9BVG3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM62Q9BVG3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM62Q9BVG3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.3■■□□□ 1
TRIM62Q9BVG3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM62Q9BVG3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.29■■□□□ 1
TRIM62Q9BVG3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.29■■□□□ 1
TRIM62Q9BVG3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM62Q9BVG3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM62Q9BVG3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM62Q9BVG3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM62Q9BVG3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM62Q9BVG3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.29■■□□□ 1
TRIM62Q9BVG3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM62Q9BVG3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.29■■□□□ 1
TRIM62Q9BVG3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.29■■□□□ 1
TRIM62Q9BVG3 AL355802.2-201ENST00000402069 882 ntBASIC21.29■■□□□ 1
TRIM62Q9BVG3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.29■■□□□ 1
TRIM62Q9BVG3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.29■■□□□ 1
TRIM62Q9BVG3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.29■■□□□ 1
TRIM62Q9BVG3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.29■■□□□ 1
TRIM62Q9BVG3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
TRIM62Q9BVG3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.29■■□□□ 1
TRIM62Q9BVG3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.29■■□□□ 1
TRIM62Q9BVG3 AC007225.1-201ENST00000566331 1836 ntBASIC21.29■■□□□ 1
TRIM62Q9BVG3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.29■■□□□ 1
TRIM62Q9BVG3 KRT17P1-201ENST00000399211 1546 ntBASIC21.29■■□□□ 1
TRIM62Q9BVG3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM62Q9BVG3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
TRIM62Q9BVG3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM62Q9BVG3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM62Q9BVG3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TRIM62Q9BVG3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.28■■□□□ 1
TRIM62Q9BVG3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM62Q9BVG3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TRIM62Q9BVG3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM62Q9BVG3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM62Q9BVG3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.28■■□□□ 1
TRIM62Q9BVG3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.28■■□□□ 1
TRIM62Q9BVG3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.28■■□□□ 1
TRIM62Q9BVG3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TRIM62Q9BVG3 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.28■■□□□ 1
TRIM62Q9BVG3 AC069152.1-201ENST00000438030 544 ntBASIC21.28■■□□□ 1
TRIM62Q9BVG3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
TRIM62Q9BVG3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.28■■□□□ 1
TRIM62Q9BVG3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TRIM62Q9BVG3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
TRIM62Q9BVG3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
TRIM62Q9BVG3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
TRIM62Q9BVG3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRIM62Q9BVG3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRIM62Q9BVG3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRIM62Q9BVG3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
TRIM62Q9BVG3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.28■■□□□ 1
TRIM62Q9BVG3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.28■■□□□ 1
TRIM62Q9BVG3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.28■■□□□ 1
TRIM62Q9BVG3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM62Q9BVG3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.27■■□□□ 1
TRIM62Q9BVG3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM62Q9BVG3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
TRIM62Q9BVG3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM62Q9BVG3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM62Q9BVG3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
TRIM62Q9BVG3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.27■■□□□ 1
TRIM62Q9BVG3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRIM62Q9BVG3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
TRIM62Q9BVG3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.27■■□□□ 1
TRIM62Q9BVG3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
TRIM62Q9BVG3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.27■□□□□ 0.99
TRIM62Q9BVG3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM62Q9BVG3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM62Q9BVG3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM62Q9BVG3 FP700111.2-201ENST00000619190 1892 ntBASIC21.26■□□□□ 0.99
TRIM62Q9BVG3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM62Q9BVG3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM62Q9BVG3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.26■□□□□ 0.99
TRIM62Q9BVG3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TRIM62Q9BVG3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM62Q9BVG3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM62Q9BVG3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.26■□□□□ 0.99
TRIM62Q9BVG3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.26■□□□□ 0.99
TRIM62Q9BVG3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.26■□□□□ 0.99
TRIM62Q9BVG3 CLDN5-201ENST00000403084 2357 ntBASIC21.26■□□□□ 0.99
TRIM62Q9BVG3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.26■□□□□ 0.99
TRIM62Q9BVG3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.26■□□□□ 0.99
TRIM62Q9BVG3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
TRIM62Q9BVG3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms