Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIMD2Q9BT23 AC105265.2-201ENST00000467189 838 ntBASIC12.11□□□□□ -0.47
LIMD2Q9BT23 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC12.11□□□□□ -0.47
LIMD2Q9BT23 CPT2-209ENST00000636935 803 ntTSL 5 BASIC12.11□□□□□ -0.47
LIMD2Q9BT23 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIMD2Q9BT23 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIMD2Q9BT23 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIMD2Q9BT23 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIMD2Q9BT23 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIMD2Q9BT23 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LIMD2Q9BT23 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC12.11□□□□□ -0.47
LIMD2Q9BT23 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIMD2Q9BT23 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
LIMD2Q9BT23 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
LIMD2Q9BT23 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LIMD2Q9BT23 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIMD2Q9BT23 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIMD2Q9BT23 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIMD2Q9BT23 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIMD2Q9BT23 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIMD2Q9BT23 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC12.1□□□□□ -0.47
LIMD2Q9BT23 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIMD2Q9BT23 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIMD2Q9BT23 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
LIMD2Q9BT23 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC12.1□□□□□ -0.47
LIMD2Q9BT23 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIMD2Q9BT23 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIMD2Q9BT23 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIMD2Q9BT23 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIMD2Q9BT23 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LIMD2Q9BT23 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LIMD2Q9BT23 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIMD2Q9BT23 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC12.1□□□□□ -0.47
LIMD2Q9BT23 KRT87P-202ENST00000534226 1464 ntBASIC12.1□□□□□ -0.47
LIMD2Q9BT23 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIMD2Q9BT23 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
LIMD2Q9BT23 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIMD2Q9BT23 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
LIMD2Q9BT23 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LIMD2Q9BT23 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC12.1□□□□□ -0.47
LIMD2Q9BT23 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIMD2Q9BT23 RHOF-204ENST00000537265 699 ntTSL 2 BASIC12.1□□□□□ -0.47
LIMD2Q9BT23 AC053503.5-201ENST00000601508 636 ntBASIC12.1□□□□□ -0.47
LIMD2Q9BT23 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIMD2Q9BT23 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIMD2Q9BT23 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIMD2Q9BT23 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIMD2Q9BT23 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIMD2Q9BT23 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LIMD2Q9BT23 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIMD2Q9BT23 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LIMD2Q9BT23 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LIMD2Q9BT23 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LIMD2Q9BT23 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LIMD2Q9BT23 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC12.09□□□□□ -0.47
LIMD2Q9BT23 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LIMD2Q9BT23 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
LIMD2Q9BT23 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LIMD2Q9BT23 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LIMD2Q9BT23 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LIMD2Q9BT23 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LIMD2Q9BT23 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
LIMD2Q9BT23 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LIMD2Q9BT23 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LIMD2Q9BT23 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LIMD2Q9BT23 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LIMD2Q9BT23 POU5F1P4-201ENST00000413175 1085 ntBASIC12.09□□□□□ -0.47
LIMD2Q9BT23 AC027612.3-201ENST00000413684 1047 ntBASIC12.09□□□□□ -0.47
LIMD2Q9BT23 RNF146-206ENST00000480444 843 ntTSL 2 BASIC12.09□□□□□ -0.47
LIMD2Q9BT23 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
LIMD2Q9BT23 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC12.09□□□□□ -0.47
LIMD2Q9BT23 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC12.09□□□□□ -0.47
LIMD2Q9BT23 PXK-203ENST00000383715 1756 ntTSL 5 BASIC12.09□□□□□ -0.47
LIMD2Q9BT23 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LIMD2Q9BT23 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
LIMD2Q9BT23 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC12.09□□□□□ -0.47
LIMD2Q9BT23 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
LIMD2Q9BT23 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LIMD2Q9BT23 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
LIMD2Q9BT23 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC12.09□□□□□ -0.47
LIMD2Q9BT23 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
LIMD2Q9BT23 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
LIMD2Q9BT23 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
LIMD2Q9BT23 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LIMD2Q9BT23 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LIMD2Q9BT23 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
LIMD2Q9BT23 AC026310.3-201ENST00000625186 2373 ntBASIC12.08□□□□□ -0.47
LIMD2Q9BT23 LINC02228-203ENST00000641970 1355 ntBASIC12.08□□□□□ -0.48
LIMD2Q9BT23 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIMD2Q9BT23 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC12.08□□□□□ -0.48
LIMD2Q9BT23 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
LIMD2Q9BT23 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIMD2Q9BT23 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC12.08□□□□□ -0.48
LIMD2Q9BT23 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIMD2Q9BT23 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC12.08□□□□□ -0.48
LIMD2Q9BT23 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
LIMD2Q9BT23 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
LIMD2Q9BT23 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIMD2Q9BT23 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIMD2Q9BT23 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms