Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.21■□□□□ 0.67
TUBA1CQ9BQE3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.21■□□□□ 0.67
TUBA1CQ9BQE3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.21■□□□□ 0.67
TUBA1CQ9BQE3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.21■□□□□ 0.67
TUBA1CQ9BQE3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.21■□□□□ 0.67
TUBA1CQ9BQE3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBA1CQ9BQE3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.21■□□□□ 0.67
TUBA1CQ9BQE3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBA1CQ9BQE3 KRT87P-202ENST00000534226 1464 ntBASIC19.21■□□□□ 0.67
TUBA1CQ9BQE3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TUBA1CQ9BQE3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.21■□□□□ 0.67
TUBA1CQ9BQE3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
TUBA1CQ9BQE3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBA1CQ9BQE3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TUBA1CQ9BQE3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TUBA1CQ9BQE3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TUBA1CQ9BQE3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TUBA1CQ9BQE3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.2■□□□□ 0.66
TUBA1CQ9BQE3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.2■□□□□ 0.66
TUBA1CQ9BQE3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TUBA1CQ9BQE3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
TUBA1CQ9BQE3 AC006015.1-201ENST00000429970 570 ntBASIC19.2■□□□□ 0.66
TUBA1CQ9BQE3 AC090192.1-201ENST00000517740 490 ntBASIC19.2■□□□□ 0.66
TUBA1CQ9BQE3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.2■□□□□ 0.66
TUBA1CQ9BQE3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.2■□□□□ 0.66
TUBA1CQ9BQE3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TUBA1CQ9BQE3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TUBA1CQ9BQE3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TUBA1CQ9BQE3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TUBA1CQ9BQE3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TUBA1CQ9BQE3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA1CQ9BQE3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.19■□□□□ 0.66
TUBA1CQ9BQE3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA1CQ9BQE3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA1CQ9BQE3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA1CQ9BQE3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TUBA1CQ9BQE3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA1CQ9BQE3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA1CQ9BQE3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA1CQ9BQE3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA1CQ9BQE3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA1CQ9BQE3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TUBA1CQ9BQE3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.19■□□□□ 0.66
TUBA1CQ9BQE3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.19■□□□□ 0.66
TUBA1CQ9BQE3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TUBA1CQ9BQE3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
TUBA1CQ9BQE3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TUBA1CQ9BQE3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.19■□□□□ 0.66
TUBA1CQ9BQE3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA1CQ9BQE3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA1CQ9BQE3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA1CQ9BQE3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA1CQ9BQE3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA1CQ9BQE3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TUBA1CQ9BQE3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TUBA1CQ9BQE3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA1CQ9BQE3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA1CQ9BQE3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.18■□□□□ 0.66
TUBA1CQ9BQE3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.18■□□□□ 0.66
TUBA1CQ9BQE3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA1CQ9BQE3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TUBA1CQ9BQE3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA1CQ9BQE3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA1CQ9BQE3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA1CQ9BQE3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA1CQ9BQE3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.18■□□□□ 0.66
TUBA1CQ9BQE3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.18■□□□□ 0.66
TUBA1CQ9BQE3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.18■□□□□ 0.66
TUBA1CQ9BQE3 AC104187.1-201ENST00000607510 612 ntBASIC19.18■□□□□ 0.66
TUBA1CQ9BQE3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA1CQ9BQE3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.18■□□□□ 0.66
TUBA1CQ9BQE3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.18■□□□□ 0.66
TUBA1CQ9BQE3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA1CQ9BQE3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA1CQ9BQE3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA1CQ9BQE3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA1CQ9BQE3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA1CQ9BQE3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TUBA1CQ9BQE3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TUBA1CQ9BQE3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TUBA1CQ9BQE3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TUBA1CQ9BQE3 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TUBA1CQ9BQE3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TUBA1CQ9BQE3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.17■□□□□ 0.66
TUBA1CQ9BQE3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TUBA1CQ9BQE3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.17■□□□□ 0.66
TUBA1CQ9BQE3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TUBA1CQ9BQE3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TUBA1CQ9BQE3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TUBA1CQ9BQE3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TUBA1CQ9BQE3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.17■□□□□ 0.66
TUBA1CQ9BQE3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.17■□□□□ 0.66
TUBA1CQ9BQE3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.17■□□□□ 0.66
TUBA1CQ9BQE3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.17■□□□□ 0.66
TUBA1CQ9BQE3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.17■□□□□ 0.66
TUBA1CQ9BQE3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.17■□□□□ 0.66
TUBA1CQ9BQE3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.17■□□□□ 0.66
TUBA1CQ9BQE3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.17■□□□□ 0.66
TUBA1CQ9BQE3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TUBA1CQ9BQE3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms