Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB18PQ96TA0 AC011767.1-201ENST00000617410 1153 ntBASIC21.69■■□□□ 1.06
PCDHB18PQ96TA0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PCDHB18PQ96TA0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHB18PQ96TA0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB18PQ96TA0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB18PQ96TA0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB18PQ96TA0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB18PQ96TA0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.69■■□□□ 1.06
PCDHB18PQ96TA0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDHB18PQ96TA0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB18PQ96TA0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB18PQ96TA0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB18PQ96TA0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB18PQ96TA0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB18PQ96TA0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDHB18PQ96TA0 AL162430.1-201ENST00000480705 870 ntBASIC21.68■■□□□ 1.06
PCDHB18PQ96TA0 AC016405.3-201ENST00000607710 860 ntBASIC21.68■■□□□ 1.06
PCDHB18PQ96TA0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDHB18PQ96TA0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB18PQ96TA0 KRT8P36-201ENST00000489121 1440 ntBASIC21.68■■□□□ 1.06
PCDHB18PQ96TA0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB18PQ96TA0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDHB18PQ96TA0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB18PQ96TA0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
PCDHB18PQ96TA0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDHB18PQ96TA0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB18PQ96TA0 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDHB18PQ96TA0 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
PCDHB18PQ96TA0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
PCDHB18PQ96TA0 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.67■■□□□ 1.06
PCDHB18PQ96TA0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PCDHB18PQ96TA0 AC006015.1-201ENST00000429970 570 ntBASIC21.67■■□□□ 1.06
PCDHB18PQ96TA0 CDV3P1-201ENST00000471403 739 ntBASIC21.67■■□□□ 1.06
PCDHB18PQ96TA0 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
PCDHB18PQ96TA0 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.67■■□□□ 1.06
PCDHB18PQ96TA0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB18PQ96TA0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB18PQ96TA0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB18PQ96TA0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PCDHB18PQ96TA0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB18PQ96TA0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.66■■□□□ 1.06
PCDHB18PQ96TA0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDHB18PQ96TA0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDHB18PQ96TA0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB18PQ96TA0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB18PQ96TA0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB18PQ96TA0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDHB18PQ96TA0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB18PQ96TA0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB18PQ96TA0 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB18PQ96TA0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
PCDHB18PQ96TA0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.66■■□□□ 1.06
PCDHB18PQ96TA0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHB18PQ96TA0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.66■■□□□ 1.06
PCDHB18PQ96TA0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB18PQ96TA0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
PCDHB18PQ96TA0 AL591742.1-201ENST00000604433 565 ntBASIC21.66■■□□□ 1.06
PCDHB18PQ96TA0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHB18PQ96TA0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB18PQ96TA0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.66■■□□□ 1.06
PCDHB18PQ96TA0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB18PQ96TA0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDHB18PQ96TA0 SMG8-203ENST00000578922 2178 ntBASIC21.65■■□□□ 1.06
PCDHB18PQ96TA0 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB18PQ96TA0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB18PQ96TA0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
PCDHB18PQ96TA0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB18PQ96TA0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.65■■□□□ 1.06
PCDHB18PQ96TA0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHB18PQ96TA0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB18PQ96TA0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDHB18PQ96TA0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHB18PQ96TA0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
PCDHB18PQ96TA0 KRT18P11-201ENST00000435214 1283 ntBASIC21.65■■□□□ 1.06
PCDHB18PQ96TA0 CNN2P6-201ENST00000439038 900 ntBASIC21.65■■□□□ 1.06
PCDHB18PQ96TA0 DUX4L16-201ENST00000555130 1264 ntBASIC21.65■■□□□ 1.06
PCDHB18PQ96TA0 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB18PQ96TA0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB18PQ96TA0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHB18PQ96TA0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHB18PQ96TA0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB18PQ96TA0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHB18PQ96TA0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
PCDHB18PQ96TA0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHB18PQ96TA0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHB18PQ96TA0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHB18PQ96TA0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHB18PQ96TA0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.64■■□□□ 1.06
PCDHB18PQ96TA0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
PCDHB18PQ96TA0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHB18PQ96TA0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.64■■□□□ 1.06
PCDHB18PQ96TA0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.64■■□□□ 1.05
PCDHB18PQ96TA0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
PCDHB18PQ96TA0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
PCDHB18PQ96TA0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHB18PQ96TA0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.64■■□□□ 1.05
PCDHB18PQ96TA0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.64■■□□□ 1.05
PCDHB18PQ96TA0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.64■■□□□ 1.05
PCDHB18PQ96TA0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms