Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.52■□□□□ 0.23
RAB40CQ96S21 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAB40CQ96S21 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
RAB40CQ96S21 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40CQ96S21 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40CQ96S21 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB40CQ96S21 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB40CQ96S21 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40CQ96S21 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40CQ96S21 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40CQ96S21 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB40CQ96S21 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40CQ96S21 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40CQ96S21 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RAB40CQ96S21 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40CQ96S21 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40CQ96S21 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.51■□□□□ 0.23
RAB40CQ96S21 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RAB40CQ96S21 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC16.51■□□□□ 0.23
RAB40CQ96S21 MIR4466-201ENST00000606121 54 ntBASIC16.51■□□□□ 0.23
RAB40CQ96S21 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40CQ96S21 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40CQ96S21 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.51■□□□□ 0.23
RAB40CQ96S21 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAB40CQ96S21 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RAB40CQ96S21 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RAB40CQ96S21 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RAB40CQ96S21 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40CQ96S21 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40CQ96S21 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40CQ96S21 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40CQ96S21 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
RAB40CQ96S21 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.5■□□□□ 0.23
RAB40CQ96S21 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40CQ96S21 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40CQ96S21 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RAB40CQ96S21 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.5■□□□□ 0.23
RAB40CQ96S21 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40CQ96S21 AC131281.2-201ENST00000520478 145 ntBASIC16.5■□□□□ 0.23
RAB40CQ96S21 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40CQ96S21 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RAB40CQ96S21 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40CQ96S21 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40CQ96S21 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40CQ96S21 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40CQ96S21 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40CQ96S21 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RAB40CQ96S21 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RAB40CQ96S21 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RAB40CQ96S21 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40CQ96S21 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40CQ96S21 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40CQ96S21 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40CQ96S21 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40CQ96S21 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RAB40CQ96S21 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB40CQ96S21 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40CQ96S21 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40CQ96S21 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40CQ96S21 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB40CQ96S21 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.49■□□□□ 0.23
RAB40CQ96S21 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40CQ96S21 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.49■□□□□ 0.23
RAB40CQ96S21 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16.49■□□□□ 0.23
RAB40CQ96S21 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.49■□□□□ 0.23
RAB40CQ96S21 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
RAB40CQ96S21 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40CQ96S21 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40CQ96S21 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40CQ96S21 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40CQ96S21 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40CQ96S21 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40CQ96S21 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.49■□□□□ 0.23
RAB40CQ96S21 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC16.49■□□□□ 0.23
RAB40CQ96S21 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RAB40CQ96S21 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40CQ96S21 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
RAB40CQ96S21 AP004607.4-201ENST00000530158 1459 ntBASIC16.48■□□□□ 0.23
RAB40CQ96S21 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40CQ96S21 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40CQ96S21 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40CQ96S21 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.48■□□□□ 0.23
RAB40CQ96S21 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB40CQ96S21 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RAB40CQ96S21 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40CQ96S21 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40CQ96S21 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB40CQ96S21 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.48■□□□□ 0.23
RAB40CQ96S21 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40CQ96S21 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
RAB40CQ96S21 SF1-220ENST00000626028 704 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB40CQ96S21 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40CQ96S21 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
RAB40CQ96S21 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB40CQ96S21 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40CQ96S21 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.48■□□□□ 0.23
RAB40CQ96S21 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.48■□□□□ 0.23
RAB40CQ96S21 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RAB40CQ96S21 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RAB40CQ96S21 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms