Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
BBS4Q96RK4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
BBS4Q96RK4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.33■□□□□ 0.68
BBS4Q96RK4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BBS4Q96RK4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
BBS4Q96RK4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
BBS4Q96RK4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.32■□□□□ 0.68
BBS4Q96RK4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BBS4Q96RK4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
BBS4Q96RK4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BBS4Q96RK4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
BBS4Q96RK4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
BBS4Q96RK4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
BBS4Q96RK4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
BBS4Q96RK4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
BBS4Q96RK4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
BBS4Q96RK4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BBS4Q96RK4 TERF1P5-201ENST00000477545 1207 ntBASIC19.32■□□□□ 0.68
BBS4Q96RK4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
BBS4Q96RK4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BBS4Q96RK4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.32■□□□□ 0.68
BBS4Q96RK4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.32■□□□□ 0.68
BBS4Q96RK4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BBS4Q96RK4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BBS4Q96RK4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.32■□□□□ 0.68
BBS4Q96RK4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
BBS4Q96RK4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
BBS4Q96RK4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.32■□□□□ 0.68
BBS4Q96RK4 AC073314.1-201ENST00000568729 2216 ntBASIC19.32■□□□□ 0.68
BBS4Q96RK4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BBS4Q96RK4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
BBS4Q96RK4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BBS4Q96RK4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
BBS4Q96RK4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
BBS4Q96RK4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BBS4Q96RK4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.31■□□□□ 0.68
BBS4Q96RK4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BBS4Q96RK4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BBS4Q96RK4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BBS4Q96RK4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.31■□□□□ 0.68
BBS4Q96RK4 AL162430.1-201ENST00000480705 870 ntBASIC19.31■□□□□ 0.68
BBS4Q96RK4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.31■□□□□ 0.68
BBS4Q96RK4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
BBS4Q96RK4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BBS4Q96RK4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
BBS4Q96RK4 GABARAPL3-202ENST00000624044 1851 ntBASIC19.31■□□□□ 0.68
BBS4Q96RK4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BBS4Q96RK4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.3■□□□□ 0.68
BBS4Q96RK4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BBS4Q96RK4 AP005212.1-201ENST00000581547 1997 ntBASIC19.3■□□□□ 0.68
BBS4Q96RK4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BBS4Q96RK4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BBS4Q96RK4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
BBS4Q96RK4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
BBS4Q96RK4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.3■□□□□ 0.68
BBS4Q96RK4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
BBS4Q96RK4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
BBS4Q96RK4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
BBS4Q96RK4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BBS4Q96RK4 AC092667.1-201ENST00000434301 2586 ntBASIC19.3■□□□□ 0.68
BBS4Q96RK4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
BBS4Q96RK4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.3■□□□□ 0.68
BBS4Q96RK4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BBS4Q96RK4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
BBS4Q96RK4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BBS4Q96RK4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
BBS4Q96RK4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
BBS4Q96RK4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
BBS4Q96RK4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BBS4Q96RK4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.29■□□□□ 0.68
BBS4Q96RK4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BBS4Q96RK4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
BBS4Q96RK4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BBS4Q96RK4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BBS4Q96RK4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BBS4Q96RK4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
BBS4Q96RK4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.29■□□□□ 0.68
BBS4Q96RK4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BBS4Q96RK4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.29■□□□□ 0.68
BBS4Q96RK4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.29■□□□□ 0.68
BBS4Q96RK4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.29■□□□□ 0.68
BBS4Q96RK4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
BBS4Q96RK4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
BBS4Q96RK4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.29■□□□□ 0.68
BBS4Q96RK4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.29■□□□□ 0.68
BBS4Q96RK4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
BBS4Q96RK4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
BBS4Q96RK4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
BBS4Q96RK4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
BBS4Q96RK4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BBS4Q96RK4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BBS4Q96RK4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.28■□□□□ 0.68
BBS4Q96RK4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BBS4Q96RK4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
BBS4Q96RK4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.28■□□□□ 0.68
BBS4Q96RK4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BBS4Q96RK4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BBS4Q96RK4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.28■□□□□ 0.68
BBS4Q96RK4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.28■□□□□ 0.68
BBS4Q96RK4 AL591742.1-201ENST00000604433 565 ntBASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms