Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COX4I2Q96KJ9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COX4I2Q96KJ9 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
COX4I2Q96KJ9 AL158211.5-201ENST00000623583 2518 ntBASIC18.81■□□□□ 0.6
COX4I2Q96KJ9 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
COX4I2Q96KJ9 LINC02228-203ENST00000641970 1355 ntBASIC18.81■□□□□ 0.6
COX4I2Q96KJ9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.81■□□□□ 0.6
COX4I2Q96KJ9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COX4I2Q96KJ9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
COX4I2Q96KJ9 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COX4I2Q96KJ9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COX4I2Q96KJ9 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
COX4I2Q96KJ9 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.81■□□□□ 0.6
COX4I2Q96KJ9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.81■□□□□ 0.6
COX4I2Q96KJ9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
COX4I2Q96KJ9 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COX4I2Q96KJ9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
COX4I2Q96KJ9 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COX4I2Q96KJ9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COX4I2Q96KJ9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.8■□□□□ 0.6
COX4I2Q96KJ9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COX4I2Q96KJ9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COX4I2Q96KJ9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COX4I2Q96KJ9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COX4I2Q96KJ9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COX4I2Q96KJ9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.8■□□□□ 0.6
COX4I2Q96KJ9 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COX4I2Q96KJ9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.8■□□□□ 0.6
COX4I2Q96KJ9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COX4I2Q96KJ9 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COX4I2Q96KJ9 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COX4I2Q96KJ9 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
COX4I2Q96KJ9 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.8■□□□□ 0.6
COX4I2Q96KJ9 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COX4I2Q96KJ9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COX4I2Q96KJ9 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COX4I2Q96KJ9 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.8■□□□□ 0.6
COX4I2Q96KJ9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
COX4I2Q96KJ9 AC073314.1-201ENST00000568729 2216 ntBASIC18.8■□□□□ 0.6
COX4I2Q96KJ9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
COX4I2Q96KJ9 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COX4I2Q96KJ9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
COX4I2Q96KJ9 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
COX4I2Q96KJ9 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COX4I2Q96KJ9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
COX4I2Q96KJ9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COX4I2Q96KJ9 NEFHP1-201ENST00000412845 2629 ntBASIC18.79■□□□□ 0.6
COX4I2Q96KJ9 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.79■□□□□ 0.6
COX4I2Q96KJ9 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
COX4I2Q96KJ9 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
COX4I2Q96KJ9 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.79■□□□□ 0.6
COX4I2Q96KJ9 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COX4I2Q96KJ9 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
COX4I2Q96KJ9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COX4I2Q96KJ9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COX4I2Q96KJ9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.79■□□□□ 0.6
COX4I2Q96KJ9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COX4I2Q96KJ9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COX4I2Q96KJ9 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COX4I2Q96KJ9 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.79■□□□□ 0.6
COX4I2Q96KJ9 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
COX4I2Q96KJ9 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COX4I2Q96KJ9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 AC116562.4-201ENST00000641316 2276 ntBASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 ABHD17AP1-201ENST00000358206 933 ntBASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 AC080038.1-201ENST00000611274 1154 ntBASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.78■□□□□ 0.6
COX4I2Q96KJ9 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COX4I2Q96KJ9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COX4I2Q96KJ9 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COX4I2Q96KJ9 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.77■□□□□ 0.6
COX4I2Q96KJ9 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 213.1 ms