Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RITA1Q96K30 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.4■□□□□ 0.22
RITA1Q96K30 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RITA1Q96K30 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.4■□□□□ 0.22
RITA1Q96K30 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.4■□□□□ 0.22
RITA1Q96K30 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RITA1Q96K30 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RITA1Q96K30 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.4■□□□□ 0.22
RITA1Q96K30 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.39■□□□□ 0.21
RITA1Q96K30 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RITA1Q96K30 AL391422.3-201ENST00000603791 2761 ntBASIC16.39■□□□□ 0.21
RITA1Q96K30 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.39■□□□□ 0.21
RITA1Q96K30 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RITA1Q96K30 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RITA1Q96K30 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
RITA1Q96K30 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.39■□□□□ 0.21
RITA1Q96K30 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.39■□□□□ 0.21
RITA1Q96K30 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.39■□□□□ 0.21
RITA1Q96K30 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.39■□□□□ 0.21
RITA1Q96K30 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RITA1Q96K30 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RITA1Q96K30 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RITA1Q96K30 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.39■□□□□ 0.21
RITA1Q96K30 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.39■□□□□ 0.21
RITA1Q96K30 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.39■□□□□ 0.21
RITA1Q96K30 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RITA1Q96K30 FAM21FP-204ENST00000608637 956 ntBASIC16.39■□□□□ 0.21
RITA1Q96K30 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.39■□□□□ 0.21
RITA1Q96K30 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RITA1Q96K30 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RITA1Q96K30 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RITA1Q96K30 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.39■□□□□ 0.21
RITA1Q96K30 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RITA1Q96K30 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
RITA1Q96K30 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
RITA1Q96K30 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RITA1Q96K30 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.39■□□□□ 0.21
RITA1Q96K30 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RITA1Q96K30 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.39■□□□□ 0.21
RITA1Q96K30 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RITA1Q96K30 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RITA1Q96K30 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.38■□□□□ 0.21
RITA1Q96K30 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.38■□□□□ 0.21
RITA1Q96K30 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
RITA1Q96K30 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RITA1Q96K30 AL512408.1-201ENST00000569378 2000 ntBASIC16.38■□□□□ 0.21
RITA1Q96K30 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
RITA1Q96K30 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RITA1Q96K30 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.38■□□□□ 0.21
RITA1Q96K30 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RITA1Q96K30 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
RITA1Q96K30 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RITA1Q96K30 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.38■□□□□ 0.21
RITA1Q96K30 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RITA1Q96K30 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.38■□□□□ 0.21
RITA1Q96K30 AC231657.2-201ENST00000624556 255 ntBASIC16.38■□□□□ 0.21
RITA1Q96K30 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
RITA1Q96K30 AC073111.5-205ENST00000641717 521 ntBASIC16.38■□□□□ 0.21
RITA1Q96K30 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RITA1Q96K30 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RITA1Q96K30 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RITA1Q96K30 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RITA1Q96K30 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RITA1Q96K30 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RITA1Q96K30 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RITA1Q96K30 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RITA1Q96K30 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RITA1Q96K30 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RITA1Q96K30 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.38■□□□□ 0.21
RITA1Q96K30 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RITA1Q96K30 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RITA1Q96K30 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.38■□□□□ 0.21
RITA1Q96K30 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RITA1Q96K30 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RITA1Q96K30 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RITA1Q96K30 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RITA1Q96K30 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RITA1Q96K30 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RITA1Q96K30 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RITA1Q96K30 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RITA1Q96K30 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RITA1Q96K30 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RITA1Q96K30 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RITA1Q96K30 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RITA1Q96K30 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RITA1Q96K30 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.37■□□□□ 0.21
RITA1Q96K30 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RITA1Q96K30 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RITA1Q96K30 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.37■□□□□ 0.21
RITA1Q96K30 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.37■□□□□ 0.21
RITA1Q96K30 RARRES2P4-201ENST00000514074 484 ntBASIC16.37■□□□□ 0.21
RITA1Q96K30 AL162412.1-201ENST00000567129 965 ntBASIC16.37■□□□□ 0.21
RITA1Q96K30 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.37■□□□□ 0.21
RITA1Q96K30 AC092666.2-201ENST00000613287 246 ntBASIC16.37■□□□□ 0.21
RITA1Q96K30 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.37■□□□□ 0.21
RITA1Q96K30 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RITA1Q96K30 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.37■□□□□ 0.21
RITA1Q96K30 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.37■□□□□ 0.21
RITA1Q96K30 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RITA1Q96K30 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms