Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.16■□□□□ 0.34
TIMD4Q96H15 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.16■□□□□ 0.34
TIMD4Q96H15 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.16■□□□□ 0.34
TIMD4Q96H15 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TIMD4Q96H15 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TIMD4Q96H15 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.15■□□□□ 0.34
TIMD4Q96H15 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TIMD4Q96H15 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.15■□□□□ 0.34
TIMD4Q96H15 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TIMD4Q96H15 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.15■□□□□ 0.34
TIMD4Q96H15 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.15■□□□□ 0.34
TIMD4Q96H15 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.15■□□□□ 0.34
TIMD4Q96H15 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TIMD4Q96H15 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TIMD4Q96H15 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.14■□□□□ 0.33
TIMD4Q96H15 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.14■□□□□ 0.33
TIMD4Q96H15 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMD4Q96H15 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMD4Q96H15 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMD4Q96H15 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.14■□□□□ 0.33
TIMD4Q96H15 POU5F1P3-201ENST00000428824 1078 ntBASIC17.14■□□□□ 0.33
TIMD4Q96H15 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.14■□□□□ 0.33
TIMD4Q96H15 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.14■□□□□ 0.33
TIMD4Q96H15 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.14■□□□□ 0.33
TIMD4Q96H15 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
TIMD4Q96H15 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.14■□□□□ 0.33
TIMD4Q96H15 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TIMD4Q96H15 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.14■□□□□ 0.33
TIMD4Q96H15 HLA-B-256ENST00000639848 1089 ntBASIC17.14■□□□□ 0.33
TIMD4Q96H15 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMD4Q96H15 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.14■□□□□ 0.33
TIMD4Q96H15 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMD4Q96H15 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.14■□□□□ 0.33
TIMD4Q96H15 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMD4Q96H15 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TIMD4Q96H15 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TIMD4Q96H15 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMD4Q96H15 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TIMD4Q96H15 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMD4Q96H15 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIMD4Q96H15 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.13■□□□□ 0.33
TIMD4Q96H15 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TIMD4Q96H15 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.13■□□□□ 0.33
TIMD4Q96H15 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TIMD4Q96H15 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TIMD4Q96H15 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TIMD4Q96H15 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIMD4Q96H15 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIMD4Q96H15 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIMD4Q96H15 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TIMD4Q96H15 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TIMD4Q96H15 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.13■□□□□ 0.33
TIMD4Q96H15 MIR4651-201ENST00000582622 73 ntBASIC17.13■□□□□ 0.33
TIMD4Q96H15 AC060766.5-201ENST00000590539 871 ntBASIC17.13■□□□□ 0.33
TIMD4Q96H15 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.13■□□□□ 0.33
TIMD4Q96H15 AL356652.1-201ENST00000615962 565 ntBASIC17.13■□□□□ 0.33
TIMD4Q96H15 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TIMD4Q96H15 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.13■□□□□ 0.33
TIMD4Q96H15 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.13■□□□□ 0.33
TIMD4Q96H15 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TIMD4Q96H15 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIMD4Q96H15 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.13■□□□□ 0.33
TIMD4Q96H15 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIMD4Q96H15 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMD4Q96H15 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMD4Q96H15 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.12■□□□□ 0.33
TIMD4Q96H15 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMD4Q96H15 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.12■□□□□ 0.33
TIMD4Q96H15 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TIMD4Q96H15 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMD4Q96H15 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMD4Q96H15 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TIMD4Q96H15 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMD4Q96H15 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMD4Q96H15 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.12■□□□□ 0.33
TIMD4Q96H15 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMD4Q96H15 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.12■□□□□ 0.33
TIMD4Q96H15 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.12■□□□□ 0.33
TIMD4Q96H15 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.12■□□□□ 0.33
TIMD4Q96H15 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TIMD4Q96H15 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.12■□□□□ 0.33
TIMD4Q96H15 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TIMD4Q96H15 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.12■□□□□ 0.33
TIMD4Q96H15 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMD4Q96H15 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TIMD4Q96H15 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.12■□□□□ 0.33
TIMD4Q96H15 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMD4Q96H15 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TIMD4Q96H15 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.12■□□□□ 0.33
TIMD4Q96H15 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMD4Q96H15 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TIMD4Q96H15 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMD4Q96H15 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TIMD4Q96H15 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMD4Q96H15 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMD4Q96H15 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TIMD4Q96H15 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TIMD4Q96H15 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.11■□□□□ 0.33
TIMD4Q96H15 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.11■□□□□ 0.33
TIMD4Q96H15 AL049796.1-201ENST00000565336 1766 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms