Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SIPA1Q96FS4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SIPA1Q96FS4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
SIPA1Q96FS4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SIPA1Q96FS4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
SIPA1Q96FS4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SIPA1Q96FS4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SIPA1Q96FS4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SIPA1Q96FS4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SIPA1Q96FS4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.51■□□□□ 0.87
SIPA1Q96FS4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.51■□□□□ 0.87
SIPA1Q96FS4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.51■□□□□ 0.87
SIPA1Q96FS4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.51■□□□□ 0.87
SIPA1Q96FS4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.51■□□□□ 0.87
SIPA1Q96FS4 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SIPA1Q96FS4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.51■□□□□ 0.87
SIPA1Q96FS4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.51■□□□□ 0.87
SIPA1Q96FS4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SIPA1Q96FS4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SIPA1Q96FS4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SIPA1Q96FS4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SIPA1Q96FS4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SIPA1Q96FS4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.5■□□□□ 0.87
SIPA1Q96FS4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SIPA1Q96FS4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SIPA1Q96FS4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
SIPA1Q96FS4 AC005829.2-201ENST00000571422 1056 ntBASIC20.5■□□□□ 0.87
SIPA1Q96FS4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.5■□□□□ 0.87
SIPA1Q96FS4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SIPA1Q96FS4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SIPA1Q96FS4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.5■□□□□ 0.87
SIPA1Q96FS4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SIPA1Q96FS4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
SIPA1Q96FS4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.5■□□□□ 0.87
SIPA1Q96FS4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SIPA1Q96FS4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SIPA1Q96FS4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SIPA1Q96FS4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SIPA1Q96FS4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SIPA1Q96FS4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.49■□□□□ 0.87
SIPA1Q96FS4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SIPA1Q96FS4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SIPA1Q96FS4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SIPA1Q96FS4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SIPA1Q96FS4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SIPA1Q96FS4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SIPA1Q96FS4 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.49■□□□□ 0.87
SIPA1Q96FS4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.49■□□□□ 0.87
SIPA1Q96FS4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
SIPA1Q96FS4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.49■□□□□ 0.87
SIPA1Q96FS4 AC006557.6-201ENST00000623071 864 ntBASIC20.49■□□□□ 0.87
SIPA1Q96FS4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
SIPA1Q96FS4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SIPA1Q96FS4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SIPA1Q96FS4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.49■□□□□ 0.87
SIPA1Q96FS4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SIPA1Q96FS4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
SIPA1Q96FS4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
SIPA1Q96FS4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.48■□□□□ 0.87
SIPA1Q96FS4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
SIPA1Q96FS4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SIPA1Q96FS4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SIPA1Q96FS4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SIPA1Q96FS4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SIPA1Q96FS4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
SIPA1Q96FS4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SIPA1Q96FS4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SIPA1Q96FS4 AL390719.1-204ENST00000412397 1219 ntBASIC20.48■□□□□ 0.87
SIPA1Q96FS4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SIPA1Q96FS4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.48■□□□□ 0.87
SIPA1Q96FS4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
SIPA1Q96FS4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.48■□□□□ 0.87
SIPA1Q96FS4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SIPA1Q96FS4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SIPA1Q96FS4 AC120498.8-201ENST00000614275 531 ntBASIC20.48■□□□□ 0.87
SIPA1Q96FS4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SIPA1Q96FS4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SIPA1Q96FS4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
SIPA1Q96FS4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SIPA1Q96FS4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SIPA1Q96FS4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SIPA1Q96FS4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SIPA1Q96FS4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SIPA1Q96FS4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SIPA1Q96FS4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SIPA1Q96FS4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SIPA1Q96FS4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SIPA1Q96FS4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SIPA1Q96FS4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SIPA1Q96FS4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SIPA1Q96FS4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SIPA1Q96FS4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SIPA1Q96FS4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SIPA1Q96FS4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SIPA1Q96FS4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.47■□□□□ 0.87
SIPA1Q96FS4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SIPA1Q96FS4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.47■□□□□ 0.87
SIPA1Q96FS4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.47■□□□□ 0.87
SIPA1Q96FS4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SIPA1Q96FS4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms