Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
SLC47A1Q96FL8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.21■□□□□ 0.67
SLC47A1Q96FL8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC47A1Q96FL8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC47A1Q96FL8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC47A1Q96FL8 AC012414.1-201ENST00000556676 535 ntBASIC19.21■□□□□ 0.67
SLC47A1Q96FL8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC47A1Q96FL8 AL354811.1-201ENST00000610286 706 ntBASIC19.21■□□□□ 0.67
SLC47A1Q96FL8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC47A1Q96FL8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC47A1Q96FL8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC47A1Q96FL8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC47A1Q96FL8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC47A1Q96FL8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
SLC47A1Q96FL8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC47A1Q96FL8 AC092720.2-201ENST00000602388 1665 ntBASIC19.2■□□□□ 0.66
SLC47A1Q96FL8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SLC47A1Q96FL8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SLC47A1Q96FL8 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC47A1Q96FL8 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC47A1Q96FL8 TCF3P1-201ENST00000423021 1937 ntBASIC19.2■□□□□ 0.66
SLC47A1Q96FL8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.2■□□□□ 0.66
SLC47A1Q96FL8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC47A1Q96FL8 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC47A1Q96FL8 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC47A1Q96FL8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC47A1Q96FL8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC47A1Q96FL8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC47A1Q96FL8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SLC47A1Q96FL8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC47A1Q96FL8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC47A1Q96FL8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC47A1Q96FL8 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC47A1Q96FL8 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC47A1Q96FL8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC47A1Q96FL8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SLC47A1Q96FL8 SMG8-203ENST00000578922 2178 ntBASIC19.19■□□□□ 0.66
SLC47A1Q96FL8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC47A1Q96FL8 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC47A1Q96FL8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC47A1Q96FL8 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC47A1Q96FL8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC47A1Q96FL8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC47A1Q96FL8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SLC47A1Q96FL8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC47A1Q96FL8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
SLC47A1Q96FL8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SLC47A1Q96FL8 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC47A1Q96FL8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SLC47A1Q96FL8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC47A1Q96FL8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC47A1Q96FL8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SLC47A1Q96FL8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
SLC47A1Q96FL8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC47A1Q96FL8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC47A1Q96FL8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC47A1Q96FL8 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC47A1Q96FL8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.18■□□□□ 0.66
SLC47A1Q96FL8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC47A1Q96FL8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC47A1Q96FL8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.18■□□□□ 0.66
SLC47A1Q96FL8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC47A1Q96FL8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC47A1Q96FL8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC47A1Q96FL8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
SLC47A1Q96FL8 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
SLC47A1Q96FL8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC47A1Q96FL8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 AC005837.3-201ENST00000612163 286 ntBASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 AL358852.1-201ENST00000623174 1268 ntBASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms