Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.99■□□□□ 0.95
HDAC11Q96DB2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC11Q96DB2 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC11Q96DB2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.99■□□□□ 0.95
HDAC11Q96DB2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.99■□□□□ 0.95
HDAC11Q96DB2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.99■□□□□ 0.95
HDAC11Q96DB2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.99■□□□□ 0.95
HDAC11Q96DB2 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC11Q96DB2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC11Q96DB2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
HDAC11Q96DB2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC11Q96DB2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.99■□□□□ 0.95
HDAC11Q96DB2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC11Q96DB2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
HDAC11Q96DB2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC11Q96DB2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.99■□□□□ 0.95
HDAC11Q96DB2 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC11Q96DB2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HDAC11Q96DB2 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
HDAC11Q96DB2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC11Q96DB2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.98■□□□□ 0.95
HDAC11Q96DB2 AC073314.1-201ENST00000568729 2216 ntBASIC20.98■□□□□ 0.95
HDAC11Q96DB2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC11Q96DB2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC11Q96DB2 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.98■□□□□ 0.95
HDAC11Q96DB2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
HDAC11Q96DB2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.98■□□□□ 0.95
HDAC11Q96DB2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC11Q96DB2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC11Q96DB2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.98■□□□□ 0.95
HDAC11Q96DB2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
HDAC11Q96DB2 AC092437.1-201ENST00000624794 1048 ntBASIC20.98■□□□□ 0.95
HDAC11Q96DB2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.98■□□□□ 0.95
HDAC11Q96DB2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
HDAC11Q96DB2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
HDAC11Q96DB2 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC11Q96DB2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
HDAC11Q96DB2 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC11Q96DB2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC11Q96DB2 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC11Q96DB2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC11Q96DB2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC11Q96DB2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC11Q96DB2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.97■□□□□ 0.95
HDAC11Q96DB2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.97■□□□□ 0.95
HDAC11Q96DB2 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC11Q96DB2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
HDAC11Q96DB2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
HDAC11Q96DB2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC11Q96DB2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC11Q96DB2 GABARAPL3-202ENST00000624044 1851 ntBASIC20.97■□□□□ 0.95
HDAC11Q96DB2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC11Q96DB2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC11Q96DB2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC11Q96DB2 AL121603.2-201ENST00000557373 2117 ntBASIC20.97■□□□□ 0.95
HDAC11Q96DB2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
HDAC11Q96DB2 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
HDAC11Q96DB2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC11Q96DB2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC11Q96DB2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC11Q96DB2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC11Q96DB2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.97■□□□□ 0.95
HDAC11Q96DB2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC11Q96DB2 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
HDAC11Q96DB2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HDAC11Q96DB2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HDAC11Q96DB2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.96■□□□□ 0.95
HDAC11Q96DB2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HDAC11Q96DB2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HDAC11Q96DB2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
HDAC11Q96DB2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HDAC11Q96DB2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.96■□□□□ 0.95
HDAC11Q96DB2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.96■□□□□ 0.95
HDAC11Q96DB2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.96■□□□□ 0.95
HDAC11Q96DB2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HDAC11Q96DB2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
HDAC11Q96DB2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HDAC11Q96DB2 AC068338.2-201ENST00000563278 1430 ntBASIC20.95■□□□□ 0.95
HDAC11Q96DB2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
HDAC11Q96DB2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.95■□□□□ 0.94
HDAC11Q96DB2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HDAC11Q96DB2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.95■□□□□ 0.94
HDAC11Q96DB2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
HDAC11Q96DB2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
HDAC11Q96DB2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HDAC11Q96DB2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.95■□□□□ 0.94
HDAC11Q96DB2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.95■□□□□ 0.94
HDAC11Q96DB2 AC016405.3-201ENST00000607710 860 ntBASIC20.95■□□□□ 0.94
HDAC11Q96DB2 AC231657.2-201ENST00000624556 255 ntBASIC20.95■□□□□ 0.94
HDAC11Q96DB2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.95■□□□□ 0.94
HDAC11Q96DB2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.95■□□□□ 0.94
HDAC11Q96DB2 LINC01521-201ENST00000504184 1943 ntBASIC20.95■□□□□ 0.94
HDAC11Q96DB2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
HDAC11Q96DB2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.95■□□□□ 0.94
HDAC11Q96DB2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.95■□□□□ 0.94
HDAC11Q96DB2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HDAC11Q96DB2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HDAC11Q96DB2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HDAC11Q96DB2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HDAC11Q96DB2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms