Protein–RNA interactions for Protein: Q96CW5

TUBGCP3, Gamma-tubulin complex component 3, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3Q96CW5 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBGCP3Q96CW5 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.79■□□□□ 0.76
TUBGCP3Q96CW5 SUDS3P1-201ENST00000505831 966 ntBASIC19.79■□□□□ 0.76
TUBGCP3Q96CW5 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
TUBGCP3Q96CW5 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.79■□□□□ 0.76
TUBGCP3Q96CW5 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TUBGCP3Q96CW5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.79■□□□□ 0.76
TUBGCP3Q96CW5 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.79■□□□□ 0.76
TUBGCP3Q96CW5 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBGCP3Q96CW5 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBGCP3Q96CW5 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBGCP3Q96CW5 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TUBGCP3Q96CW5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
TUBGCP3Q96CW5 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.79■□□□□ 0.76
TUBGCP3Q96CW5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
TUBGCP3Q96CW5 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TUBGCP3Q96CW5 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBGCP3Q96CW5 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TUBGCP3Q96CW5 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.78■□□□□ 0.76
TUBGCP3Q96CW5 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBGCP3Q96CW5 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBGCP3Q96CW5 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TUBGCP3Q96CW5 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.78■□□□□ 0.76
TUBGCP3Q96CW5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TUBGCP3Q96CW5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBGCP3Q96CW5 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.78■□□□□ 0.76
TUBGCP3Q96CW5 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TUBGCP3Q96CW5 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.78■□□□□ 0.76
TUBGCP3Q96CW5 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.78■□□□□ 0.76
TUBGCP3Q96CW5 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.78■□□□□ 0.76
TUBGCP3Q96CW5 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TUBGCP3Q96CW5 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TUBGCP3Q96CW5 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TUBGCP3Q96CW5 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBGCP3Q96CW5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TUBGCP3Q96CW5 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBGCP3Q96CW5 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
TUBGCP3Q96CW5 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TUBGCP3Q96CW5 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.77■□□□□ 0.76
TUBGCP3Q96CW5 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
TUBGCP3Q96CW5 KRT16P2-201ENST00000414673 1423 ntBASIC19.77■□□□□ 0.76
TUBGCP3Q96CW5 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.77■□□□□ 0.76
TUBGCP3Q96CW5 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TUBGCP3Q96CW5 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TUBGCP3Q96CW5 AC007952.6-201ENST00000573168 2673 ntBASIC19.77■□□□□ 0.76
TUBGCP3Q96CW5 AC003957.1-201ENST00000625108 2673 ntBASIC19.77■□□□□ 0.76
TUBGCP3Q96CW5 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.77■□□□□ 0.76
TUBGCP3Q96CW5 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.77■□□□□ 0.76
TUBGCP3Q96CW5 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.77■□□□□ 0.76
TUBGCP3Q96CW5 AC138907.5-202ENST00000569484 235 ntBASIC19.77■□□□□ 0.76
TUBGCP3Q96CW5 AC120498.10-201ENST00000621827 505 ntBASIC19.77■□□□□ 0.76
TUBGCP3Q96CW5 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.75
TUBGCP3Q96CW5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TUBGCP3Q96CW5 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.77■□□□□ 0.75
TUBGCP3Q96CW5 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TUBGCP3Q96CW5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBGCP3Q96CW5 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.76■□□□□ 0.75
TUBGCP3Q96CW5 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TUBGCP3Q96CW5 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBGCP3Q96CW5 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.76■□□□□ 0.75
TUBGCP3Q96CW5 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBGCP3Q96CW5 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.76■□□□□ 0.75
TUBGCP3Q96CW5 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBGCP3Q96CW5 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.76■□□□□ 0.75
TUBGCP3Q96CW5 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TUBGCP3Q96CW5 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.76■□□□□ 0.75
TUBGCP3Q96CW5 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBGCP3Q96CW5 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.76■□□□□ 0.75
TUBGCP3Q96CW5 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.76■□□□□ 0.75
TUBGCP3Q96CW5 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TUBGCP3Q96CW5 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBGCP3Q96CW5 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBGCP3Q96CW5 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBGCP3Q96CW5 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBGCP3Q96CW5 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TUBGCP3Q96CW5 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TUBGCP3Q96CW5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TUBGCP3Q96CW5 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TUBGCP3Q96CW5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TUBGCP3Q96CW5 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TUBGCP3Q96CW5 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TUBGCP3Q96CW5 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TUBGCP3Q96CW5 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
TUBGCP3Q96CW5 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TUBGCP3Q96CW5 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
TUBGCP3Q96CW5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TUBGCP3Q96CW5 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TUBGCP3Q96CW5 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
TUBGCP3Q96CW5 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TUBGCP3Q96CW5 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TUBGCP3Q96CW5 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TUBGCP3Q96CW5 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TUBGCP3Q96CW5 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TUBGCP3Q96CW5 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
TUBGCP3Q96CW5 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TUBGCP3Q96CW5 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.74■□□□□ 0.75
TUBGCP3Q96CW5 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TUBGCP3Q96CW5 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TUBGCP3Q96CW5 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.74■□□□□ 0.75
TUBGCP3Q96CW5 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms