Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 AC083880.1-201ENST00000608266 535 ntBASIC20.3■□□□□ 0.84
SCAMP4Q969E2 MIR2861-201ENST00000636310 90 ntBASIC20.3■□□□□ 0.84
SCAMP4Q969E2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.3■□□□□ 0.84
SCAMP4Q969E2 AL121603.2-201ENST00000557373 2117 ntBASIC20.3■□□□□ 0.84
SCAMP4Q969E2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.3■□□□□ 0.84
SCAMP4Q969E2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.3■□□□□ 0.84
SCAMP4Q969E2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SCAMP4Q969E2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
SCAMP4Q969E2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SCAMP4Q969E2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SCAMP4Q969E2 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCAMP4Q969E2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCAMP4Q969E2 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCAMP4Q969E2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SCAMP4Q969E2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCAMP4Q969E2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCAMP4Q969E2 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.29■□□□□ 0.84
SCAMP4Q969E2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.29■□□□□ 0.84
SCAMP4Q969E2 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCAMP4Q969E2 AC097658.1-201ENST00000475555 843 ntBASIC20.29■□□□□ 0.84
SCAMP4Q969E2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.29■□□□□ 0.84
SCAMP4Q969E2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.29■□□□□ 0.84
SCAMP4Q969E2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCAMP4Q969E2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.29■□□□□ 0.84
SCAMP4Q969E2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCAMP4Q969E2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.29■□□□□ 0.84
SCAMP4Q969E2 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCAMP4Q969E2 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SCAMP4Q969E2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
SCAMP4Q969E2 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SCAMP4Q969E2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCAMP4Q969E2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.29■□□□□ 0.84
SCAMP4Q969E2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCAMP4Q969E2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SCAMP4Q969E2 FP700111.2-201ENST00000619190 1892 ntBASIC20.28■□□□□ 0.84
SCAMP4Q969E2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.28■□□□□ 0.84
SCAMP4Q969E2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCAMP4Q969E2 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCAMP4Q969E2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCAMP4Q969E2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCAMP4Q969E2 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCAMP4Q969E2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SCAMP4Q969E2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCAMP4Q969E2 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCAMP4Q969E2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCAMP4Q969E2 PGM5P4-201ENST00000421970 445 ntBASIC20.28■□□□□ 0.84
SCAMP4Q969E2 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SCAMP4Q969E2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SCAMP4Q969E2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCAMP4Q969E2 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCAMP4Q969E2 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.28■□□□□ 0.84
SCAMP4Q969E2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SCAMP4Q969E2 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SCAMP4Q969E2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.28■□□□□ 0.84
SCAMP4Q969E2 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SCAMP4Q969E2 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SCAMP4Q969E2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCAMP4Q969E2 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCAMP4Q969E2 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SCAMP4Q969E2 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SCAMP4Q969E2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SCAMP4Q969E2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCAMP4Q969E2 KRT18P6-201ENST00000555540 1265 ntBASIC20.27■□□□□ 0.84
SCAMP4Q969E2 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.27■□□□□ 0.84
SCAMP4Q969E2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SCAMP4Q969E2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SCAMP4Q969E2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SCAMP4Q969E2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SCAMP4Q969E2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.27■□□□□ 0.83
SCAMP4Q969E2 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SCAMP4Q969E2 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.27■□□□□ 0.83
SCAMP4Q969E2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
SCAMP4Q969E2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.26■□□□□ 0.83
SCAMP4Q969E2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCAMP4Q969E2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCAMP4Q969E2 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SCAMP4Q969E2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCAMP4Q969E2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.26■□□□□ 0.83
SCAMP4Q969E2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.26■□□□□ 0.83
SCAMP4Q969E2 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.26■□□□□ 0.83
SCAMP4Q969E2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCAMP4Q969E2 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SCAMP4Q969E2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.26■□□□□ 0.83
SCAMP4Q969E2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.26■□□□□ 0.83
SCAMP4Q969E2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SCAMP4Q969E2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.26■□□□□ 0.83
SCAMP4Q969E2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCAMP4Q969E2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SCAMP4Q969E2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
SCAMP4Q969E2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.26■□□□□ 0.83
SCAMP4Q969E2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.26■□□□□ 0.83
SCAMP4Q969E2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.26■□□□□ 0.83
SCAMP4Q969E2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.26■□□□□ 0.83
SCAMP4Q969E2 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SCAMP4Q969E2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.26■□□□□ 0.83
SCAMP4Q969E2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.26■□□□□ 0.83
SCAMP4Q969E2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SCAMP4Q969E2 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCAMP4Q969E2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SCAMP4Q969E2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms