Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
ATL1Q8WXF7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
ATL1Q8WXF7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATL1Q8WXF7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.9■□□□□ 0.78
ATL1Q8WXF7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATL1Q8WXF7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATL1Q8WXF7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATL1Q8WXF7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.9■□□□□ 0.78
ATL1Q8WXF7 PGM5P4-201ENST00000421970 445 ntBASIC19.9■□□□□ 0.78
ATL1Q8WXF7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.9■□□□□ 0.78
ATL1Q8WXF7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.9■□□□□ 0.78
ATL1Q8WXF7 AC231657.2-201ENST00000624556 255 ntBASIC19.9■□□□□ 0.78
ATL1Q8WXF7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.9■□□□□ 0.78
ATL1Q8WXF7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATL1Q8WXF7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.9■□□□□ 0.78
ATL1Q8WXF7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATL1Q8WXF7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.9■□□□□ 0.78
ATL1Q8WXF7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATL1Q8WXF7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATL1Q8WXF7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATL1Q8WXF7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
ATL1Q8WXF7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.9■□□□□ 0.78
ATL1Q8WXF7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
ATL1Q8WXF7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
ATL1Q8WXF7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.9■□□□□ 0.78
ATL1Q8WXF7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATL1Q8WXF7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATL1Q8WXF7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATL1Q8WXF7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATL1Q8WXF7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATL1Q8WXF7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATL1Q8WXF7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATL1Q8WXF7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.89■□□□□ 0.77
ATL1Q8WXF7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
ATL1Q8WXF7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATL1Q8WXF7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATL1Q8WXF7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATL1Q8WXF7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATL1Q8WXF7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.89■□□□□ 0.77
ATL1Q8WXF7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.89■□□□□ 0.77
ATL1Q8WXF7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.89■□□□□ 0.77
ATL1Q8WXF7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATL1Q8WXF7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.89■□□□□ 0.77
ATL1Q8WXF7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
ATL1Q8WXF7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATL1Q8WXF7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATL1Q8WXF7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATL1Q8WXF7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATL1Q8WXF7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
ATL1Q8WXF7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.88■□□□□ 0.77
ATL1Q8WXF7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.88■□□□□ 0.77
ATL1Q8WXF7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
ATL1Q8WXF7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
ATL1Q8WXF7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATL1Q8WXF7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATL1Q8WXF7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATL1Q8WXF7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATL1Q8WXF7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.88■□□□□ 0.77
ATL1Q8WXF7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.88■□□□□ 0.77
ATL1Q8WXF7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.88■□□□□ 0.77
ATL1Q8WXF7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATL1Q8WXF7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.88■□□□□ 0.77
ATL1Q8WXF7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATL1Q8WXF7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
ATL1Q8WXF7 LINC01521-201ENST00000504184 1943 ntBASIC19.88■□□□□ 0.77
ATL1Q8WXF7 GABARAPL3-202ENST00000624044 1851 ntBASIC19.88■□□□□ 0.77
ATL1Q8WXF7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATL1Q8WXF7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATL1Q8WXF7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
ATL1Q8WXF7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATL1Q8WXF7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATL1Q8WXF7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
ATL1Q8WXF7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
ATL1Q8WXF7 AP005212.1-201ENST00000581547 1997 ntBASIC19.87■□□□□ 0.77
ATL1Q8WXF7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
ATL1Q8WXF7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ATL1Q8WXF7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ATL1Q8WXF7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.87■□□□□ 0.77
ATL1Q8WXF7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.87■□□□□ 0.77
ATL1Q8WXF7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
ATL1Q8WXF7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
ATL1Q8WXF7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
ATL1Q8WXF7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
ATL1Q8WXF7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.87■□□□□ 0.77
ATL1Q8WXF7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ATL1Q8WXF7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.87■□□□□ 0.77
ATL1Q8WXF7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATL1Q8WXF7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATL1Q8WXF7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.86■□□□□ 0.77
ATL1Q8WXF7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
ATL1Q8WXF7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ATL1Q8WXF7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATL1Q8WXF7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ATL1Q8WXF7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
ATL1Q8WXF7 AC007322.1-201ENST00000426983 750 ntBASIC19.86■□□□□ 0.77
ATL1Q8WXF7 CNN2P6-201ENST00000439038 900 ntBASIC19.86■□□□□ 0.77
ATL1Q8WXF7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
ATL1Q8WXF7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.86■□□□□ 0.77
ATL1Q8WXF7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
ATL1Q8WXF7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms