Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.42■■□□□ 1.02
RNF139Q8WU17 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF139Q8WU17 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.42■■□□□ 1.02
RNF139Q8WU17 AC092118.2-201ENST00000613495 667 ntBASIC21.42■■□□□ 1.02
RNF139Q8WU17 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.42■■□□□ 1.02
RNF139Q8WU17 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.42■■□□□ 1.02
RNF139Q8WU17 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
RNF139Q8WU17 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
RNF139Q8WU17 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF139Q8WU17 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.41■■□□□ 1.02
RNF139Q8WU17 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF139Q8WU17 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.41■■□□□ 1.02
RNF139Q8WU17 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF139Q8WU17 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF139Q8WU17 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF139Q8WU17 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF139Q8WU17 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RNF139Q8WU17 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF139Q8WU17 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
RNF139Q8WU17 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.41■■□□□ 1.02
RNF139Q8WU17 PGM5P4-201ENST00000421970 445 ntBASIC21.41■■□□□ 1.02
RNF139Q8WU17 AC069152.1-201ENST00000438030 544 ntBASIC21.41■■□□□ 1.02
RNF139Q8WU17 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.41■■□□□ 1.02
RNF139Q8WU17 AL589743.5-201ENST00000616611 1050 ntBASIC21.41■■□□□ 1.02
RNF139Q8WU17 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF139Q8WU17 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF139Q8WU17 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF139Q8WU17 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF139Q8WU17 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF139Q8WU17 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.41■■□□□ 1.02
RNF139Q8WU17 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF139Q8WU17 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RNF139Q8WU17 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
RNF139Q8WU17 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.4■■□□□ 1.02
RNF139Q8WU17 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.4■■□□□ 1.02
RNF139Q8WU17 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF139Q8WU17 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.4■■□□□ 1.02
RNF139Q8WU17 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RNF139Q8WU17 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF139Q8WU17 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF139Q8WU17 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RNF139Q8WU17 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.4■■□□□ 1.02
RNF139Q8WU17 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF139Q8WU17 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.4■■□□□ 1.02
RNF139Q8WU17 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.4■■□□□ 1.02
RNF139Q8WU17 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.4■■□□□ 1.02
RNF139Q8WU17 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.4■■□□□ 1.02
RNF139Q8WU17 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.4■■□□□ 1.02
RNF139Q8WU17 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.4■■□□□ 1.02
RNF139Q8WU17 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF139Q8WU17 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF139Q8WU17 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF139Q8WU17 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF139Q8WU17 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RNF139Q8WU17 AC006128.1-201ENST00000624704 1661 ntBASIC21.4■■□□□ 1.02
RNF139Q8WU17 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF139Q8WU17 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RNF139Q8WU17 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
RNF139Q8WU17 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RNF139Q8WU17 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RNF139Q8WU17 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
RNF139Q8WU17 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.39■■□□□ 1.02
RNF139Q8WU17 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RNF139Q8WU17 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
RNF139Q8WU17 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RNF139Q8WU17 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF139Q8WU17 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF139Q8WU17 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF139Q8WU17 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF139Q8WU17 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
RNF139Q8WU17 AC073210.2-201ENST00000430369 194 ntBASIC21.39■■□□□ 1.01
RNF139Q8WU17 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.39■■□□□ 1.01
RNF139Q8WU17 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RNF139Q8WU17 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.39■■□□□ 1.01
RNF139Q8WU17 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF139Q8WU17 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF139Q8WU17 KRT17P1-201ENST00000399211 1546 ntBASIC21.39■■□□□ 1.01
RNF139Q8WU17 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.39■■□□□ 1.01
RNF139Q8WU17 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.39■■□□□ 1.01
RNF139Q8WU17 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF139Q8WU17 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.38■■□□□ 1.01
RNF139Q8WU17 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF139Q8WU17 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.38■■□□□ 1.01
RNF139Q8WU17 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.38■■□□□ 1.01
RNF139Q8WU17 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.38■■□□□ 1.01
RNF139Q8WU17 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.38■■□□□ 1.01
RNF139Q8WU17 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF139Q8WU17 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF139Q8WU17 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.38■■□□□ 1.01
RNF139Q8WU17 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.38■■□□□ 1.01
RNF139Q8WU17 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.38■■□□□ 1.01
RNF139Q8WU17 AC098934.4-201ENST00000564127 592 ntBASIC21.38■■□□□ 1.01
RNF139Q8WU17 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
RNF139Q8WU17 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.38■■□□□ 1.01
RNF139Q8WU17 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF139Q8WU17 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.38■■□□□ 1.01
RNF139Q8WU17 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RNF139Q8WU17 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
RNF139Q8WU17 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.38■■□□□ 1.01
RNF139Q8WU17 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms