Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGCLL1Q8TB92 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
HMGCLL1Q8TB92 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HMGCLL1Q8TB92 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.06■□□□□ 0.8
HMGCLL1Q8TB92 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGCLL1Q8TB92 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HMGCLL1Q8TB92 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.05■□□□□ 0.8
HMGCLL1Q8TB92 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
HMGCLL1Q8TB92 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGCLL1Q8TB92 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGCLL1Q8TB92 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.05■□□□□ 0.8
HMGCLL1Q8TB92 AC121338.2-201ENST00000622535 1744 ntBASIC20.05■□□□□ 0.8
HMGCLL1Q8TB92 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGCLL1Q8TB92 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
HMGCLL1Q8TB92 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
HMGCLL1Q8TB92 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGCLL1Q8TB92 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.05■□□□□ 0.8
HMGCLL1Q8TB92 AC007322.1-201ENST00000426983 750 ntBASIC20.05■□□□□ 0.8
HMGCLL1Q8TB92 AC026185.1-201ENST00000445748 174 ntBASIC20.05■□□□□ 0.8
HMGCLL1Q8TB92 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.05■□□□□ 0.8
HMGCLL1Q8TB92 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.05■□□□□ 0.8
HMGCLL1Q8TB92 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
HMGCLL1Q8TB92 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.05■□□□□ 0.8
HMGCLL1Q8TB92 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.05■□□□□ 0.8
HMGCLL1Q8TB92 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGCLL1Q8TB92 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGCLL1Q8TB92 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HMGCLL1Q8TB92 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
HMGCLL1Q8TB92 AC007225.1-201ENST00000566331 1836 ntBASIC20.04■□□□□ 0.8
HMGCLL1Q8TB92 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCLL1Q8TB92 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCLL1Q8TB92 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCLL1Q8TB92 AC020907.5-201ENST00000624372 1936 ntBASIC20.04■□□□□ 0.8
HMGCLL1Q8TB92 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCLL1Q8TB92 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCLL1Q8TB92 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCLL1Q8TB92 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCLL1Q8TB92 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.04■□□□□ 0.8
HMGCLL1Q8TB92 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.04■□□□□ 0.8
HMGCLL1Q8TB92 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
HMGCLL1Q8TB92 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.04■□□□□ 0.8
HMGCLL1Q8TB92 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.04■□□□□ 0.8
HMGCLL1Q8TB92 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCLL1Q8TB92 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCLL1Q8TB92 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
HMGCLL1Q8TB92 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HMGCLL1Q8TB92 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCLL1Q8TB92 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.03■□□□□ 0.8
HMGCLL1Q8TB92 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.03■□□□□ 0.8
HMGCLL1Q8TB92 AC068338.2-201ENST00000563278 1430 ntBASIC20.03■□□□□ 0.8
HMGCLL1Q8TB92 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.03■□□□□ 0.8
HMGCLL1Q8TB92 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCLL1Q8TB92 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCLL1Q8TB92 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCLL1Q8TB92 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCLL1Q8TB92 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCLL1Q8TB92 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCLL1Q8TB92 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.03■□□□□ 0.8
HMGCLL1Q8TB92 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCLL1Q8TB92 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCLL1Q8TB92 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCLL1Q8TB92 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.03■□□□□ 0.8
HMGCLL1Q8TB92 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCLL1Q8TB92 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCLL1Q8TB92 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.03■□□□□ 0.8
HMGCLL1Q8TB92 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.03■□□□□ 0.8
HMGCLL1Q8TB92 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCLL1Q8TB92 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.03■□□□□ 0.8
HMGCLL1Q8TB92 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCLL1Q8TB92 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
HMGCLL1Q8TB92 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HMGCLL1Q8TB92 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.02■□□□□ 0.8
HMGCLL1Q8TB92 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMGCLL1Q8TB92 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMGCLL1Q8TB92 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMGCLL1Q8TB92 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
HMGCLL1Q8TB92 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMGCLL1Q8TB92 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMGCLL1Q8TB92 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMGCLL1Q8TB92 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMGCLL1Q8TB92 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
HMGCLL1Q8TB92 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.02■□□□□ 0.8
HMGCLL1Q8TB92 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.02■□□□□ 0.8
HMGCLL1Q8TB92 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
HMGCLL1Q8TB92 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HMGCLL1Q8TB92 AL162377.1-201ENST00000618844 1793 ntBASIC20.02■□□□□ 0.8
HMGCLL1Q8TB92 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
HMGCLL1Q8TB92 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
HMGCLL1Q8TB92 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.02■□□□□ 0.79
HMGCLL1Q8TB92 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
HMGCLL1Q8TB92 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HMGCLL1Q8TB92 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HMGCLL1Q8TB92 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HMGCLL1Q8TB92 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.01■□□□□ 0.79
HMGCLL1Q8TB92 AC116050.2-201ENST00000612102 1779 ntBASIC20.01■□□□□ 0.79
HMGCLL1Q8TB92 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.01■□□□□ 0.79
HMGCLL1Q8TB92 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.01■□□□□ 0.79
HMGCLL1Q8TB92 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.01■□□□□ 0.79
HMGCLL1Q8TB92 AC112907.3-201ENST00000577781 2400 ntBASIC20.01■□□□□ 0.79
HMGCLL1Q8TB92 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms