Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HIPK4Q8NE63 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HIPK4Q8NE63 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.75■□□□□ 0.75
HIPK4Q8NE63 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HIPK4Q8NE63 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HIPK4Q8NE63 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.74■□□□□ 0.75
HIPK4Q8NE63 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
HIPK4Q8NE63 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
HIPK4Q8NE63 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.74■□□□□ 0.75
HIPK4Q8NE63 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HIPK4Q8NE63 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HIPK4Q8NE63 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HIPK4Q8NE63 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HIPK4Q8NE63 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.74■□□□□ 0.75
HIPK4Q8NE63 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HIPK4Q8NE63 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.74■□□□□ 0.75
HIPK4Q8NE63 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HIPK4Q8NE63 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HIPK4Q8NE63 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.74■□□□□ 0.75
HIPK4Q8NE63 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.73■□□□□ 0.75
HIPK4Q8NE63 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HIPK4Q8NE63 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HIPK4Q8NE63 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
HIPK4Q8NE63 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HIPK4Q8NE63 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.73■□□□□ 0.75
HIPK4Q8NE63 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.73■□□□□ 0.75
HIPK4Q8NE63 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
HIPK4Q8NE63 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.73■□□□□ 0.75
HIPK4Q8NE63 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.73■□□□□ 0.75
HIPK4Q8NE63 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.73■□□□□ 0.75
HIPK4Q8NE63 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.73■□□□□ 0.75
HIPK4Q8NE63 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
HIPK4Q8NE63 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
HIPK4Q8NE63 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.73■□□□□ 0.75
HIPK4Q8NE63 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HIPK4Q8NE63 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.73■□□□□ 0.75
HIPK4Q8NE63 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HIPK4Q8NE63 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HIPK4Q8NE63 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HIPK4Q8NE63 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.73■□□□□ 0.75
HIPK4Q8NE63 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.72■□□□□ 0.75
HIPK4Q8NE63 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIPK4Q8NE63 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIPK4Q8NE63 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HIPK4Q8NE63 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.72■□□□□ 0.75
HIPK4Q8NE63 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIPK4Q8NE63 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIPK4Q8NE63 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIPK4Q8NE63 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HIPK4Q8NE63 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
HIPK4Q8NE63 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.72■□□□□ 0.75
HIPK4Q8NE63 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIPK4Q8NE63 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.72■□□□□ 0.75
HIPK4Q8NE63 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIPK4Q8NE63 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.72■□□□□ 0.75
HIPK4Q8NE63 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIPK4Q8NE63 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIPK4Q8NE63 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HIPK4Q8NE63 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
HIPK4Q8NE63 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HIPK4Q8NE63 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIPK4Q8NE63 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HIPK4Q8NE63 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HIPK4Q8NE63 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
HIPK4Q8NE63 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIPK4Q8NE63 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.71■□□□□ 0.75
HIPK4Q8NE63 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.71■□□□□ 0.75
HIPK4Q8NE63 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HIPK4Q8NE63 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
HIPK4Q8NE63 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HIPK4Q8NE63 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIPK4Q8NE63 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
HIPK4Q8NE63 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HIPK4Q8NE63 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.71■□□□□ 0.75
HIPK4Q8NE63 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.71■□□□□ 0.75
HIPK4Q8NE63 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIPK4Q8NE63 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIPK4Q8NE63 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
HIPK4Q8NE63 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIPK4Q8NE63 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.71■□□□□ 0.75
HIPK4Q8NE63 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HIPK4Q8NE63 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HIPK4Q8NE63 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIPK4Q8NE63 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIPK4Q8NE63 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIPK4Q8NE63 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIPK4Q8NE63 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
HIPK4Q8NE63 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HIPK4Q8NE63 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIPK4Q8NE63 BX842568.3-201ENST00000418104 571 ntBASIC19.7■□□□□ 0.74
HIPK4Q8NE63 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.7■□□□□ 0.74
HIPK4Q8NE63 SMUG1P1-201ENST00000590640 811 ntBASIC19.7■□□□□ 0.74
HIPK4Q8NE63 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.7■□□□□ 0.74
HIPK4Q8NE63 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIPK4Q8NE63 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIPK4Q8NE63 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
HIPK4Q8NE63 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIPK4Q8NE63 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIPK4Q8NE63 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIPK4Q8NE63 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms