Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CCDC168Q8NDH2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC168Q8NDH2 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CCDC168Q8NDH2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC168Q8NDH2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC168Q8NDH2 AC092053.2-201ENST00000640557 1818 ntBASIC17.18■□□□□ 0.34
CCDC168Q8NDH2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC168Q8NDH2 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.18■□□□□ 0.34
CCDC168Q8NDH2 AC087742.1-201ENST00000575880 1738 ntBASIC17.18■□□□□ 0.34
CCDC168Q8NDH2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC168Q8NDH2 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC168Q8NDH2 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCDC168Q8NDH2 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.18■□□□□ 0.34
CCDC168Q8NDH2 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.18■□□□□ 0.34
CCDC168Q8NDH2 AC063952.2-201ENST00000498792 1227 ntBASIC17.18■□□□□ 0.34
CCDC168Q8NDH2 AC116562.2-201ENST00000507042 360 ntBASIC17.18■□□□□ 0.34
CCDC168Q8NDH2 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CCDC168Q8NDH2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC168Q8NDH2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC168Q8NDH2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC168Q8NDH2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC168Q8NDH2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC168Q8NDH2 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC168Q8NDH2 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC168Q8NDH2 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC168Q8NDH2 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC168Q8NDH2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.17■□□□□ 0.34
CCDC168Q8NDH2 KRT16P5-201ENST00000455284 522 ntBASIC17.17■□□□□ 0.34
CCDC168Q8NDH2 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC168Q8NDH2 AC022616.7-201ENST00000525383 220 ntBASIC17.17■□□□□ 0.34
CCDC168Q8NDH2 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC168Q8NDH2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CCDC168Q8NDH2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.17■□□□□ 0.34
CCDC168Q8NDH2 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC168Q8NDH2 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.17■□□□□ 0.34
CCDC168Q8NDH2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC168Q8NDH2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC168Q8NDH2 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCDC168Q8NDH2 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CCDC168Q8NDH2 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CCDC168Q8NDH2 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC168Q8NDH2 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC168Q8NDH2 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.16■□□□□ 0.34
CCDC168Q8NDH2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC168Q8NDH2 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC168Q8NDH2 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CCDC168Q8NDH2 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC168Q8NDH2 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC168Q8NDH2 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.16■□□□□ 0.34
CCDC168Q8NDH2 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC168Q8NDH2 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.16■□□□□ 0.34
CCDC168Q8NDH2 GPALPP1-207ENST00000611650 899 ntBASIC17.16■□□□□ 0.34
CCDC168Q8NDH2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC168Q8NDH2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC168Q8NDH2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC168Q8NDH2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC168Q8NDH2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC168Q8NDH2 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC168Q8NDH2 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CCDC168Q8NDH2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC168Q8NDH2 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC168Q8NDH2 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC168Q8NDH2 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.15■□□□□ 0.34
CCDC168Q8NDH2 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.15■□□□□ 0.34
CCDC168Q8NDH2 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC168Q8NDH2 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC168Q8NDH2 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC168Q8NDH2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC168Q8NDH2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC168Q8NDH2 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC168Q8NDH2 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC168Q8NDH2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC168Q8NDH2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC168Q8NDH2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CCDC168Q8NDH2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CCDC168Q8NDH2 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CCDC168Q8NDH2 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC168Q8NDH2 AL031133.1-201ENST00000406807 723 ntBASIC17.15■□□□□ 0.34
CCDC168Q8NDH2 BX664615.1-201ENST00000443558 458 ntBASIC17.15■□□□□ 0.34
CCDC168Q8NDH2 CLEC4GP1-201ENST00000596555 870 ntBASIC17.15■□□□□ 0.34
CCDC168Q8NDH2 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
CCDC168Q8NDH2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC168Q8NDH2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC168Q8NDH2 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC168Q8NDH2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC168Q8NDH2 HCG4P8-203ENST00000443049 980 ntBASIC17.14■□□□□ 0.34
CCDC168Q8NDH2 ATP5G1P1-201ENST00000448724 379 ntBASIC17.14■□□□□ 0.34
CCDC168Q8NDH2 AP002982.1-201ENST00000492365 877 ntBASIC17.14■□□□□ 0.34
CCDC168Q8NDH2 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.14■□□□□ 0.34
CCDC168Q8NDH2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.14■□□□□ 0.34
CCDC168Q8NDH2 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.14■□□□□ 0.34
CCDC168Q8NDH2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC168Q8NDH2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC168Q8NDH2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC168Q8NDH2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC168Q8NDH2 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC168Q8NDH2 LINC01238-205ENST00000567549 1107 ntBASIC17.14■□□□□ 0.33
CCDC168Q8NDH2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC168Q8NDH2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC168Q8NDH2 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms