Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
LSMEM1Q8N8F7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LSMEM1Q8N8F7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LSMEM1Q8N8F7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSMEM1Q8N8F7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.68■□□□□ 0.58
LSMEM1Q8N8F7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSMEM1Q8N8F7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
LSMEM1Q8N8F7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSMEM1Q8N8F7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSMEM1Q8N8F7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
LSMEM1Q8N8F7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LSMEM1Q8N8F7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
LSMEM1Q8N8F7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSMEM1Q8N8F7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.67■□□□□ 0.58
LSMEM1Q8N8F7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
LSMEM1Q8N8F7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.67■□□□□ 0.58
LSMEM1Q8N8F7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.67■□□□□ 0.58
LSMEM1Q8N8F7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
LSMEM1Q8N8F7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSMEM1Q8N8F7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSMEM1Q8N8F7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.67■□□□□ 0.58
LSMEM1Q8N8F7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSMEM1Q8N8F7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
LSMEM1Q8N8F7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSMEM1Q8N8F7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LSMEM1Q8N8F7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSMEM1Q8N8F7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.67■□□□□ 0.58
LSMEM1Q8N8F7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.67■□□□□ 0.58
LSMEM1Q8N8F7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.67■□□□□ 0.58
LSMEM1Q8N8F7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
LSMEM1Q8N8F7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSMEM1Q8N8F7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSMEM1Q8N8F7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
LSMEM1Q8N8F7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSMEM1Q8N8F7 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LSMEM1Q8N8F7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
LSMEM1Q8N8F7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LSMEM1Q8N8F7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LSMEM1Q8N8F7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LSMEM1Q8N8F7 AC092720.2-201ENST00000602388 1665 ntBASIC18.66■□□□□ 0.58
LSMEM1Q8N8F7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSMEM1Q8N8F7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
LSMEM1Q8N8F7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
LSMEM1Q8N8F7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSMEM1Q8N8F7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.66■□□□□ 0.58
LSMEM1Q8N8F7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LSMEM1Q8N8F7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSMEM1Q8N8F7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSMEM1Q8N8F7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LSMEM1Q8N8F7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LSMEM1Q8N8F7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
LSMEM1Q8N8F7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSMEM1Q8N8F7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSMEM1Q8N8F7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LSMEM1Q8N8F7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.66■□□□□ 0.58
LSMEM1Q8N8F7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LSMEM1Q8N8F7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
LSMEM1Q8N8F7 AC087623.3-201ENST00000607047 1098 ntBASIC18.66■□□□□ 0.58
LSMEM1Q8N8F7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.66■□□□□ 0.58
LSMEM1Q8N8F7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.66■□□□□ 0.58
LSMEM1Q8N8F7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSMEM1Q8N8F7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LSMEM1Q8N8F7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSMEM1Q8N8F7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.66■□□□□ 0.58
LSMEM1Q8N8F7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSMEM1Q8N8F7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LSMEM1Q8N8F7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSMEM1Q8N8F7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LSMEM1Q8N8F7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LSMEM1Q8N8F7 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.65■□□□□ 0.58
LSMEM1Q8N8F7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSMEM1Q8N8F7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
LSMEM1Q8N8F7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.65■□□□□ 0.58
LSMEM1Q8N8F7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
LSMEM1Q8N8F7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LSMEM1Q8N8F7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSMEM1Q8N8F7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSMEM1Q8N8F7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.65■□□□□ 0.58
LSMEM1Q8N8F7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.65■□□□□ 0.58
LSMEM1Q8N8F7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.65■□□□□ 0.58
LSMEM1Q8N8F7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
LSMEM1Q8N8F7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.65■□□□□ 0.58
LSMEM1Q8N8F7 CDV3P1-201ENST00000471403 739 ntBASIC18.65■□□□□ 0.58
LSMEM1Q8N8F7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.65■□□□□ 0.58
LSMEM1Q8N8F7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.65■□□□□ 0.58
LSMEM1Q8N8F7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSMEM1Q8N8F7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LSMEM1Q8N8F7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSMEM1Q8N8F7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LSMEM1Q8N8F7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LSMEM1Q8N8F7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
LSMEM1Q8N8F7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
LSMEM1Q8N8F7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
LSMEM1Q8N8F7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
LSMEM1Q8N8F7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSMEM1Q8N8F7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSMEM1Q8N8F7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSMEM1Q8N8F7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
LSMEM1Q8N8F7 KRT18P11-201ENST00000435214 1283 ntBASIC18.64■□□□□ 0.57
LSMEM1Q8N8F7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms