Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PAF1Q8N7H5 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.93■□□□□ 0.94
PAF1Q8N7H5 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.92■□□□□ 0.94
PAF1Q8N7H5 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.92■□□□□ 0.94
PAF1Q8N7H5 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PAF1Q8N7H5 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.92■□□□□ 0.94
PAF1Q8N7H5 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PAF1Q8N7H5 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PAF1Q8N7H5 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PAF1Q8N7H5 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.92■□□□□ 0.94
PAF1Q8N7H5 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PAF1Q8N7H5 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PAF1Q8N7H5 CNN2P6-201ENST00000439038 900 ntBASIC20.92■□□□□ 0.94
PAF1Q8N7H5 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.92■□□□□ 0.94
PAF1Q8N7H5 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.92■□□□□ 0.94
PAF1Q8N7H5 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
PAF1Q8N7H5 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.92■□□□□ 0.94
PAF1Q8N7H5 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PAF1Q8N7H5 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PAF1Q8N7H5 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PAF1Q8N7H5 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PAF1Q8N7H5 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PAF1Q8N7H5 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PAF1Q8N7H5 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PAF1Q8N7H5 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PAF1Q8N7H5 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PAF1Q8N7H5 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.91■□□□□ 0.94
PAF1Q8N7H5 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PAF1Q8N7H5 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PAF1Q8N7H5 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
PAF1Q8N7H5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.91■□□□□ 0.94
PAF1Q8N7H5 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.91■□□□□ 0.94
PAF1Q8N7H5 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.91■□□□□ 0.94
PAF1Q8N7H5 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.91■□□□□ 0.94
PAF1Q8N7H5 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PAF1Q8N7H5 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.91■□□□□ 0.94
PAF1Q8N7H5 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.91■□□□□ 0.94
PAF1Q8N7H5 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.91■□□□□ 0.94
PAF1Q8N7H5 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PAF1Q8N7H5 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PAF1Q8N7H5 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PAF1Q8N7H5 AF106564.1-201ENST00000607058 2553 ntBASIC20.91■□□□□ 0.94
PAF1Q8N7H5 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PAF1Q8N7H5 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.9■□□□□ 0.94
PAF1Q8N7H5 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
PAF1Q8N7H5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PAF1Q8N7H5 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.9■□□□□ 0.94
PAF1Q8N7H5 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.9■□□□□ 0.94
PAF1Q8N7H5 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PAF1Q8N7H5 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PAF1Q8N7H5 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
PAF1Q8N7H5 CYP2T1P-201ENST00000432607 1285 ntBASIC20.9■□□□□ 0.94
PAF1Q8N7H5 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.9■□□□□ 0.94
PAF1Q8N7H5 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.9■□□□□ 0.94
PAF1Q8N7H5 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PAF1Q8N7H5 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PAF1Q8N7H5 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PAF1Q8N7H5 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PAF1Q8N7H5 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PAF1Q8N7H5 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PAF1Q8N7H5 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PAF1Q8N7H5 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PAF1Q8N7H5 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PAF1Q8N7H5 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
PAF1Q8N7H5 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PAF1Q8N7H5 AC007322.3-201ENST00000426526 701 ntBASIC20.89■□□□□ 0.93
PAF1Q8N7H5 CROCCP5-201ENST00000436658 830 ntBASIC20.89■□□□□ 0.93
PAF1Q8N7H5 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.89■□□□□ 0.93
PAF1Q8N7H5 AC007322.4-201ENST00000509611 723 ntBASIC20.89■□□□□ 0.93
PAF1Q8N7H5 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
PAF1Q8N7H5 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.89■□□□□ 0.93
PAF1Q8N7H5 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.89■□□□□ 0.93
PAF1Q8N7H5 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
PAF1Q8N7H5 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PAF1Q8N7H5 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PAF1Q8N7H5 AC068338.2-201ENST00000563278 1430 ntBASIC20.88■□□□□ 0.93
PAF1Q8N7H5 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PAF1Q8N7H5 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
PAF1Q8N7H5 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PAF1Q8N7H5 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PAF1Q8N7H5 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PAF1Q8N7H5 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.88■□□□□ 0.93
PAF1Q8N7H5 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PAF1Q8N7H5 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.88■□□□□ 0.93
PAF1Q8N7H5 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.88■□□□□ 0.93
PAF1Q8N7H5 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PAF1Q8N7H5 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.88■□□□□ 0.93
PAF1Q8N7H5 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PAF1Q8N7H5 FEM1AP4-201ENST00000443167 1987 ntBASIC20.88■□□□□ 0.93
PAF1Q8N7H5 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PAF1Q8N7H5 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PAF1Q8N7H5 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.88■□□□□ 0.93
PAF1Q8N7H5 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.88■□□□□ 0.93
PAF1Q8N7H5 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PAF1Q8N7H5 AC116050.2-201ENST00000612102 1779 ntBASIC20.87■□□□□ 0.93
PAF1Q8N7H5 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PAF1Q8N7H5 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PAF1Q8N7H5 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.87■□□□□ 0.93
PAF1Q8N7H5 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.87■□□□□ 0.93
PAF1Q8N7H5 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms