Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.92■□□□□ 0.62
DEPDC4Q8N2C3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DEPDC4Q8N2C3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.92■□□□□ 0.62
DEPDC4Q8N2C3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.92■□□□□ 0.62
DEPDC4Q8N2C3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.92■□□□□ 0.62
DEPDC4Q8N2C3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DEPDC4Q8N2C3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
DEPDC4Q8N2C3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.92■□□□□ 0.62
DEPDC4Q8N2C3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.92■□□□□ 0.62
DEPDC4Q8N2C3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.92■□□□□ 0.62
DEPDC4Q8N2C3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.92■□□□□ 0.62
DEPDC4Q8N2C3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DEPDC4Q8N2C3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DEPDC4Q8N2C3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.92■□□□□ 0.62
DEPDC4Q8N2C3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.91■□□□□ 0.62
DEPDC4Q8N2C3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DEPDC4Q8N2C3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DEPDC4Q8N2C3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.91■□□□□ 0.62
DEPDC4Q8N2C3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.91■□□□□ 0.62
DEPDC4Q8N2C3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DEPDC4Q8N2C3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DEPDC4Q8N2C3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.91■□□□□ 0.62
DEPDC4Q8N2C3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.91■□□□□ 0.62
DEPDC4Q8N2C3 MIR6084-201ENST00000622012 110 ntBASIC18.91■□□□□ 0.62
DEPDC4Q8N2C3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DEPDC4Q8N2C3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
DEPDC4Q8N2C3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DEPDC4Q8N2C3 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DEPDC4Q8N2C3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.91■□□□□ 0.62
DEPDC4Q8N2C3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DEPDC4Q8N2C3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DEPDC4Q8N2C3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
DEPDC4Q8N2C3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DEPDC4Q8N2C3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.9■□□□□ 0.62
DEPDC4Q8N2C3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.9■□□□□ 0.62
DEPDC4Q8N2C3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DEPDC4Q8N2C3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.9■□□□□ 0.62
DEPDC4Q8N2C3 LINC02228-203ENST00000641970 1355 ntBASIC18.9■□□□□ 0.62
DEPDC4Q8N2C3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DEPDC4Q8N2C3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DEPDC4Q8N2C3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
DEPDC4Q8N2C3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
DEPDC4Q8N2C3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.89■□□□□ 0.62
DEPDC4Q8N2C3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
DEPDC4Q8N2C3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DEPDC4Q8N2C3 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
DEPDC4Q8N2C3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
DEPDC4Q8N2C3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DEPDC4Q8N2C3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
DEPDC4Q8N2C3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
DEPDC4Q8N2C3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
DEPDC4Q8N2C3 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.89■□□□□ 0.61
DEPDC4Q8N2C3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.89■□□□□ 0.61
DEPDC4Q8N2C3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DEPDC4Q8N2C3 AL162430.1-201ENST00000480705 870 ntBASIC18.89■□□□□ 0.61
DEPDC4Q8N2C3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.89■□□□□ 0.61
DEPDC4Q8N2C3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
DEPDC4Q8N2C3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.89■□□□□ 0.61
DEPDC4Q8N2C3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.89■□□□□ 0.61
DEPDC4Q8N2C3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DEPDC4Q8N2C3 AL512408.1-201ENST00000569378 2000 ntBASIC18.89■□□□□ 0.61
DEPDC4Q8N2C3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DEPDC4Q8N2C3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.89■□□□□ 0.61
DEPDC4Q8N2C3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.89■□□□□ 0.61
DEPDC4Q8N2C3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DEPDC4Q8N2C3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
DEPDC4Q8N2C3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DEPDC4Q8N2C3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DEPDC4Q8N2C3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DEPDC4Q8N2C3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DEPDC4Q8N2C3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.88■□□□□ 0.61
DEPDC4Q8N2C3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DEPDC4Q8N2C3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DEPDC4Q8N2C3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DEPDC4Q8N2C3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DEPDC4Q8N2C3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
DEPDC4Q8N2C3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DEPDC4Q8N2C3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DEPDC4Q8N2C3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DEPDC4Q8N2C3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.88■□□□□ 0.61
DEPDC4Q8N2C3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DEPDC4Q8N2C3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DEPDC4Q8N2C3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.88■□□□□ 0.61
DEPDC4Q8N2C3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.88■□□□□ 0.61
DEPDC4Q8N2C3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.88■□□□□ 0.61
DEPDC4Q8N2C3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DEPDC4Q8N2C3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DEPDC4Q8N2C3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DEPDC4Q8N2C3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DEPDC4Q8N2C3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DEPDC4Q8N2C3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
DEPDC4Q8N2C3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DEPDC4Q8N2C3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DEPDC4Q8N2C3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DEPDC4Q8N2C3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.88■□□□□ 0.61
DEPDC4Q8N2C3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.88■□□□□ 0.61
DEPDC4Q8N2C3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DEPDC4Q8N2C3 FP700111.2-201ENST00000619190 1892 ntBASIC18.88■□□□□ 0.61
DEPDC4Q8N2C3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
DEPDC4Q8N2C3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms