Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
DDX60Q8IY21 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
DDX60Q8IY21 HES2-206ENST00000489730 730 ntTSL 2 BASIC25.41■■□□□ 1.66
DDX60Q8IY21 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC25.41■■□□□ 1.66
DDX60Q8IY21 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
DDX60Q8IY21 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC25.41■■□□□ 1.66
DDX60Q8IY21 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC25.41■■□□□ 1.66
DDX60Q8IY21 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
DDX60Q8IY21 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
DDX60Q8IY21 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
DDX60Q8IY21 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
DDX60Q8IY21 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
DDX60Q8IY21 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC25.4■■□□□ 1.66
DDX60Q8IY21 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC25.4■■□□□ 1.66
DDX60Q8IY21 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
DDX60Q8IY21 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC25.4■■□□□ 1.66
DDX60Q8IY21 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC25.4■■□□□ 1.66
DDX60Q8IY21 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
DDX60Q8IY21 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC25.4■■□□□ 1.66
DDX60Q8IY21 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC25.4■■□□□ 1.66
DDX60Q8IY21 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
DDX60Q8IY21 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
DDX60Q8IY21 Z98882.1-201ENST00000622160 2253 ntBASIC25.39■■□□□ 1.66
DDX60Q8IY21 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
DDX60Q8IY21 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
DDX60Q8IY21 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
DDX60Q8IY21 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
DDX60Q8IY21 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
DDX60Q8IY21 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
DDX60Q8IY21 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
DDX60Q8IY21 SPIB-206ENST00000596074 847 ntTSL 2 BASIC25.39■■□□□ 1.65
DDX60Q8IY21 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
DDX60Q8IY21 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
DDX60Q8IY21 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
DDX60Q8IY21 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
DDX60Q8IY21 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
DDX60Q8IY21 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
DDX60Q8IY21 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
DDX60Q8IY21 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
DDX60Q8IY21 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
DDX60Q8IY21 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
DDX60Q8IY21 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
DDX60Q8IY21 AC239809.2-201ENST00000415381 517 ntBASIC25.38■■□□□ 1.65
DDX60Q8IY21 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
DDX60Q8IY21 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
DDX60Q8IY21 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
DDX60Q8IY21 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC25.38■■□□□ 1.65
DDX60Q8IY21 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
DDX60Q8IY21 SNORA78-201ENST00000459373 127 ntBASIC25.37■■□□□ 1.65
DDX60Q8IY21 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
DDX60Q8IY21 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
DDX60Q8IY21 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
DDX60Q8IY21 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
DDX60Q8IY21 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
DDX60Q8IY21 MYB-221ENST00000527615 2381 ntTSL 5 BASIC25.37■■□□□ 1.65
DDX60Q8IY21 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
DDX60Q8IY21 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
DDX60Q8IY21 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
DDX60Q8IY21 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC25.37■■□□□ 1.65
DDX60Q8IY21 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
DDX60Q8IY21 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
DDX60Q8IY21 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
DDX60Q8IY21 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
DDX60Q8IY21 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC25.37■■□□□ 1.65
DDX60Q8IY21 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC25.37■■□□□ 1.65
DDX60Q8IY21 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC25.37■■□□□ 1.65
DDX60Q8IY21 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
DDX60Q8IY21 Z99916.2-201ENST00000604037 246 ntBASIC25.37■■□□□ 1.65
DDX60Q8IY21 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC25.36■■□□□ 1.65
DDX60Q8IY21 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC25.36■■□□□ 1.65
DDX60Q8IY21 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
DDX60Q8IY21 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
DDX60Q8IY21 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
DDX60Q8IY21 MIR718-201ENST00000390190 70 ntBASIC25.36■■□□□ 1.65
DDX60Q8IY21 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC25.36■■□□□ 1.65
DDX60Q8IY21 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC25.36■■□□□ 1.65
DDX60Q8IY21 STK25-234ENST00000535007 2459 ntTSL 2 BASIC25.36■■□□□ 1.65
DDX60Q8IY21 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
DDX60Q8IY21 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
DDX60Q8IY21 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
DDX60Q8IY21 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC25.35■■□□□ 1.65
DDX60Q8IY21 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
DDX60Q8IY21 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC25.35■■□□□ 1.65
DDX60Q8IY21 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
DDX60Q8IY21 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC25.35■■□□□ 1.65
DDX60Q8IY21 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
DDX60Q8IY21 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
DDX60Q8IY21 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC25.35■■□□□ 1.65
DDX60Q8IY21 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
DDX60Q8IY21 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
DDX60Q8IY21 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
DDX60Q8IY21 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC25.34■■□□□ 1.65
DDX60Q8IY21 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC25.34■■□□□ 1.65
DDX60Q8IY21 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
DDX60Q8IY21 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
DDX60Q8IY21 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC25.34■■□□□ 1.65
DDX60Q8IY21 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
DDX60Q8IY21 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC25.34■■□□□ 1.65
DDX60Q8IY21 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC25.34■■□□□ 1.65
DDX60Q8IY21 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms