Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC25.33■■□□□ 1.65
SMC5Q8IY18 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC25.33■■□□□ 1.65
SMC5Q8IY18 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SMC5Q8IY18 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC25.33■■□□□ 1.65
SMC5Q8IY18 TERF1P5-201ENST00000477545 1207 ntBASIC25.33■■□□□ 1.65
SMC5Q8IY18 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC25.33■■□□□ 1.65
SMC5Q8IY18 BRI3-207ENST00000539286 699 ntTSL 2 BASIC25.33■■□□□ 1.65
SMC5Q8IY18 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC25.33■■□□□ 1.65
SMC5Q8IY18 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC25.33■■□□□ 1.65
SMC5Q8IY18 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC25.33■■□□□ 1.65
SMC5Q8IY18 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SMC5Q8IY18 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC25.33■■□□□ 1.64
SMC5Q8IY18 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC25.32■■□□□ 1.64
SMC5Q8IY18 SMG8-203ENST00000578922 2178 ntBASIC25.32■■□□□ 1.64
SMC5Q8IY18 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC25.32■■□□□ 1.64
SMC5Q8IY18 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC25.32■■□□□ 1.64
SMC5Q8IY18 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC25.32■■□□□ 1.64
SMC5Q8IY18 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SMC5Q8IY18 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SMC5Q8IY18 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SMC5Q8IY18 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
SMC5Q8IY18 AC026271.2-201ENST00000428091 497 ntBASIC25.32■■□□□ 1.64
SMC5Q8IY18 DBI-210ENST00000542275 757 ntTSL 5 BASIC25.32■■□□□ 1.64
SMC5Q8IY18 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC25.32■■□□□ 1.64
SMC5Q8IY18 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
SMC5Q8IY18 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC25.32■■□□□ 1.64
SMC5Q8IY18 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SMC5Q8IY18 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
SMC5Q8IY18 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC25.32■■□□□ 1.64
SMC5Q8IY18 TCF3P1-201ENST00000423021 1937 ntBASIC25.31■■□□□ 1.64
SMC5Q8IY18 PCDHAC2-203ENST00000615316 3011 ntBASIC25.31■■□□□ 1.64
SMC5Q8IY18 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SMC5Q8IY18 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SMC5Q8IY18 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC25.31■■□□□ 1.64
SMC5Q8IY18 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SMC5Q8IY18 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SMC5Q8IY18 AFG3L1P-217ENST00000557444 2447 ntBASIC25.31■■□□□ 1.64
SMC5Q8IY18 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SMC5Q8IY18 KRT18P5-201ENST00000436075 1291 ntBASIC25.31■■□□□ 1.64
SMC5Q8IY18 CDV3P1-201ENST00000471403 739 ntBASIC25.31■■□□□ 1.64
SMC5Q8IY18 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC25.31■■□□□ 1.64
SMC5Q8IY18 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
SMC5Q8IY18 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SMC5Q8IY18 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SMC5Q8IY18 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SMC5Q8IY18 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SMC5Q8IY18 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
SMC5Q8IY18 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SMC5Q8IY18 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SMC5Q8IY18 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SMC5Q8IY18 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SMC5Q8IY18 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC25.3■■□□□ 1.64
SMC5Q8IY18 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SMC5Q8IY18 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SMC5Q8IY18 FAM21FP-204ENST00000608637 956 ntBASIC25.3■■□□□ 1.64
SMC5Q8IY18 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC25.3■■□□□ 1.64
SMC5Q8IY18 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC25.3■■□□□ 1.64
SMC5Q8IY18 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SMC5Q8IY18 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
SMC5Q8IY18 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC25.29■■□□□ 1.64
SMC5Q8IY18 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC25.29■■□□□ 1.64
SMC5Q8IY18 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SMC5Q8IY18 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SMC5Q8IY18 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC25.29■■□□□ 1.64
SMC5Q8IY18 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SMC5Q8IY18 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC25.29■■□□□ 1.64
SMC5Q8IY18 AC007322.4-201ENST00000509611 723 ntBASIC25.29■■□□□ 1.64
SMC5Q8IY18 PLLP-204ENST00000569059 665 ntTSL 3 BASIC25.29■■□□□ 1.64
SMC5Q8IY18 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC25.29■■□□□ 1.64
SMC5Q8IY18 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SMC5Q8IY18 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SMC5Q8IY18 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC25.29■■□□□ 1.64
SMC5Q8IY18 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
SMC5Q8IY18 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
SMC5Q8IY18 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC25.28■■□□□ 1.64
SMC5Q8IY18 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SMC5Q8IY18 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC25.28■■□□□ 1.64
SMC5Q8IY18 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC25.28■■□□□ 1.64
SMC5Q8IY18 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
SMC5Q8IY18 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SMC5Q8IY18 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SMC5Q8IY18 AL591742.1-201ENST00000604433 565 ntBASIC25.28■■□□□ 1.64
SMC5Q8IY18 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SMC5Q8IY18 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SMC5Q8IY18 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SMC5Q8IY18 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SMC5Q8IY18 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SMC5Q8IY18 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SMC5Q8IY18 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
SMC5Q8IY18 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC25.27■■□□□ 1.64
SMC5Q8IY18 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC25.27■■□□□ 1.64
SMC5Q8IY18 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SMC5Q8IY18 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC25.27■■□□□ 1.64
SMC5Q8IY18 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SMC5Q8IY18 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
SMC5Q8IY18 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
SMC5Q8IY18 HSCB-202ENST00000398941 955 ntTSL 2 BASIC25.27■■□□□ 1.64
SMC5Q8IY18 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC25.27■■□□□ 1.64
SMC5Q8IY18 AL162412.1-201ENST00000567129 965 ntBASIC25.27■■□□□ 1.64
SMC5Q8IY18 WWOX-218ENST00000627394 894 ntTSL 5 BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms