Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM48Q8IWZ4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM48Q8IWZ4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TRIM48Q8IWZ4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM48Q8IWZ4 AL137060.1-201ENST00000618151 2648 ntBASIC20.01■□□□□ 0.79
TRIM48Q8IWZ4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.01■□□□□ 0.79
TRIM48Q8IWZ4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM48Q8IWZ4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM48Q8IWZ4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM48Q8IWZ4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM48Q8IWZ4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20■□□□□ 0.79
TRIM48Q8IWZ4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TRIM48Q8IWZ4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM48Q8IWZ4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TRIM48Q8IWZ4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM48Q8IWZ4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM48Q8IWZ4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20■□□□□ 0.79
TRIM48Q8IWZ4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM48Q8IWZ4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM48Q8IWZ4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20■□□□□ 0.79
TRIM48Q8IWZ4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20■□□□□ 0.79
TRIM48Q8IWZ4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20■□□□□ 0.79
TRIM48Q8IWZ4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM48Q8IWZ4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM48Q8IWZ4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM48Q8IWZ4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM48Q8IWZ4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM48Q8IWZ4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM48Q8IWZ4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20■□□□□ 0.79
TRIM48Q8IWZ4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM48Q8IWZ4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM48Q8IWZ4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20■□□□□ 0.79
TRIM48Q8IWZ4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
TRIM48Q8IWZ4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM48Q8IWZ4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM48Q8IWZ4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM48Q8IWZ4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM48Q8IWZ4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM48Q8IWZ4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM48Q8IWZ4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM48Q8IWZ4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM48Q8IWZ4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM48Q8IWZ4 PGM5P4-201ENST00000421970 445 ntBASIC19.99■□□□□ 0.79
TRIM48Q8IWZ4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM48Q8IWZ4 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.99■□□□□ 0.79
TRIM48Q8IWZ4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM48Q8IWZ4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM48Q8IWZ4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM48Q8IWZ4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM48Q8IWZ4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM48Q8IWZ4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM48Q8IWZ4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM48Q8IWZ4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM48Q8IWZ4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM48Q8IWZ4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TRIM48Q8IWZ4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM48Q8IWZ4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TRIM48Q8IWZ4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TRIM48Q8IWZ4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
TRIM48Q8IWZ4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM48Q8IWZ4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.98■□□□□ 0.79
TRIM48Q8IWZ4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM48Q8IWZ4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.98■□□□□ 0.79
TRIM48Q8IWZ4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM48Q8IWZ4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
TRIM48Q8IWZ4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRIM48Q8IWZ4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.98■□□□□ 0.79
TRIM48Q8IWZ4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
TRIM48Q8IWZ4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TRIM48Q8IWZ4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
TRIM48Q8IWZ4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM48Q8IWZ4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.97■□□□□ 0.79
TRIM48Q8IWZ4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM48Q8IWZ4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM48Q8IWZ4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
TRIM48Q8IWZ4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.97■□□□□ 0.79
TRIM48Q8IWZ4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.97■□□□□ 0.79
TRIM48Q8IWZ4 AC083880.1-201ENST00000608266 535 ntBASIC19.97■□□□□ 0.79
TRIM48Q8IWZ4 MYC-209ENST00000641252 345 ntBASIC19.97■□□□□ 0.79
TRIM48Q8IWZ4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM48Q8IWZ4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM48Q8IWZ4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM48Q8IWZ4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.97■□□□□ 0.79
TRIM48Q8IWZ4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TRIM48Q8IWZ4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM48Q8IWZ4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM48Q8IWZ4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM48Q8IWZ4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRIM48Q8IWZ4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM48Q8IWZ4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.96■□□□□ 0.79
TRIM48Q8IWZ4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM48Q8IWZ4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM48Q8IWZ4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TRIM48Q8IWZ4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM48Q8IWZ4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM48Q8IWZ4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM48Q8IWZ4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM48Q8IWZ4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM48Q8IWZ4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM48Q8IWZ4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms