Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCDC71Q8IV32 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC71Q8IV32 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CCDC71Q8IV32 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.1■□□□□ 0.65
CCDC71Q8IV32 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC71Q8IV32 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC71Q8IV32 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC71Q8IV32 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC71Q8IV32 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CCDC71Q8IV32 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC71Q8IV32 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC71Q8IV32 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC71Q8IV32 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC71Q8IV32 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC71Q8IV32 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCDC71Q8IV32 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC71Q8IV32 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC71Q8IV32 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC71Q8IV32 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC71Q8IV32 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC71Q8IV32 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC71Q8IV32 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
CCDC71Q8IV32 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC71Q8IV32 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC71Q8IV32 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC71Q8IV32 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC71Q8IV32 UBE2DNL-204ENST00000602536 740 ntBASIC19.09■□□□□ 0.65
CCDC71Q8IV32 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
CCDC71Q8IV32 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CCDC71Q8IV32 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CCDC71Q8IV32 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC71Q8IV32 AC020907.5-201ENST00000624372 1936 ntBASIC19.09■□□□□ 0.65
CCDC71Q8IV32 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC71Q8IV32 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC71Q8IV32 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC71Q8IV32 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
CCDC71Q8IV32 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CCDC71Q8IV32 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC71Q8IV32 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.65
CCDC71Q8IV32 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.08■□□□□ 0.65
CCDC71Q8IV32 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.08■□□□□ 0.65
CCDC71Q8IV32 AP004607.7-201ENST00000527152 1677 ntBASIC19.08■□□□□ 0.65
CCDC71Q8IV32 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC71Q8IV32 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC71Q8IV32 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC71Q8IV32 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC71Q8IV32 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CCDC71Q8IV32 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CCDC71Q8IV32 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.08■□□□□ 0.64
CCDC71Q8IV32 AL034346.1-201ENST00000568244 1277 ntBASIC19.08■□□□□ 0.64
CCDC71Q8IV32 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CCDC71Q8IV32 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.08■□□□□ 0.64
CCDC71Q8IV32 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CCDC71Q8IV32 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC71Q8IV32 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC71Q8IV32 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC71Q8IV32 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.08■□□□□ 0.64
CCDC71Q8IV32 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC71Q8IV32 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CCDC71Q8IV32 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC71Q8IV32 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC71Q8IV32 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC71Q8IV32 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC71Q8IV32 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC71Q8IV32 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC71Q8IV32 AP001160.3-201ENST00000601484 763 ntBASIC19.07■□□□□ 0.64
CCDC71Q8IV32 AL050303.2-201ENST00000619798 666 ntBASIC19.07■□□□□ 0.64
CCDC71Q8IV32 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC71Q8IV32 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC71Q8IV32 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CCDC71Q8IV32 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CCDC71Q8IV32 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC71Q8IV32 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC71Q8IV32 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CCDC71Q8IV32 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC71Q8IV32 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC71Q8IV32 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC71Q8IV32 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC71Q8IV32 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC71Q8IV32 AL162377.1-201ENST00000618844 1793 ntBASIC19.06■□□□□ 0.64
CCDC71Q8IV32 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC71Q8IV32 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC71Q8IV32 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC71Q8IV32 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC71Q8IV32 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC71Q8IV32 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC71Q8IV32 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC71Q8IV32 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC71Q8IV32 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC71Q8IV32 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CCDC71Q8IV32 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC71Q8IV32 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC71Q8IV32 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC71Q8IV32 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC71Q8IV32 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC71Q8IV32 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC71Q8IV32 AC083906.2-201ENST00000511578 360 ntBASIC19.06■□□□□ 0.64
CCDC71Q8IV32 DUX4L16-201ENST00000555130 1264 ntBASIC19.06■□□□□ 0.64
CCDC71Q8IV32 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC71Q8IV32 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms