Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
VRK2Q86Y07 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
VRK2Q86Y07 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
VRK2Q86Y07 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VRK2Q86Y07 AC097381.1-201ENST00000429019 1296 ntBASIC18.87■□□□□ 0.61
VRK2Q86Y07 AC034268.1-201ENST00000441047 882 ntBASIC18.87■□□□□ 0.61
VRK2Q86Y07 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VRK2Q86Y07 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VRK2Q86Y07 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.87■□□□□ 0.61
VRK2Q86Y07 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
VRK2Q86Y07 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VRK2Q86Y07 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VRK2Q86Y07 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.87■□□□□ 0.61
VRK2Q86Y07 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VRK2Q86Y07 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.87■□□□□ 0.61
VRK2Q86Y07 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VRK2Q86Y07 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VRK2Q86Y07 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.86■□□□□ 0.61
VRK2Q86Y07 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.86■□□□□ 0.61
VRK2Q86Y07 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VRK2Q86Y07 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
VRK2Q86Y07 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VRK2Q86Y07 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.86■□□□□ 0.61
VRK2Q86Y07 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.86■□□□□ 0.61
VRK2Q86Y07 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.86■□□□□ 0.61
VRK2Q86Y07 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VRK2Q86Y07 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VRK2Q86Y07 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.86■□□□□ 0.61
VRK2Q86Y07 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
VRK2Q86Y07 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
VRK2Q86Y07 AC007322.3-201ENST00000426526 701 ntBASIC18.86■□□□□ 0.61
VRK2Q86Y07 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VRK2Q86Y07 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.86■□□□□ 0.61
VRK2Q86Y07 AC087623.3-201ENST00000607047 1098 ntBASIC18.86■□□□□ 0.61
VRK2Q86Y07 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.86■□□□□ 0.61
VRK2Q86Y07 MYCNOS-205ENST00000641950 531 ntBASIC18.86■□□□□ 0.61
VRK2Q86Y07 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.86■□□□□ 0.61
VRK2Q86Y07 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VRK2Q86Y07 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.86■□□□□ 0.61
VRK2Q86Y07 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.86■□□□□ 0.61
VRK2Q86Y07 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
VRK2Q86Y07 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VRK2Q86Y07 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VRK2Q86Y07 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VRK2Q86Y07 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VRK2Q86Y07 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
VRK2Q86Y07 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
VRK2Q86Y07 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
VRK2Q86Y07 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VRK2Q86Y07 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VRK2Q86Y07 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
VRK2Q86Y07 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VRK2Q86Y07 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
VRK2Q86Y07 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
VRK2Q86Y07 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.85■□□□□ 0.61
VRK2Q86Y07 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.85■□□□□ 0.61
VRK2Q86Y07 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.85■□□□□ 0.61
VRK2Q86Y07 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
VRK2Q86Y07 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.85■□□□□ 0.61
VRK2Q86Y07 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VRK2Q86Y07 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VRK2Q86Y07 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VRK2Q86Y07 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
VRK2Q86Y07 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
VRK2Q86Y07 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
VRK2Q86Y07 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.84■□□□□ 0.61
VRK2Q86Y07 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.84■□□□□ 0.61
VRK2Q86Y07 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.84■□□□□ 0.61
VRK2Q86Y07 AC099778.1-201ENST00000568593 1911 ntBASIC18.84■□□□□ 0.61
VRK2Q86Y07 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.84■□□□□ 0.61
VRK2Q86Y07 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VRK2Q86Y07 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.84■□□□□ 0.61
VRK2Q86Y07 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VRK2Q86Y07 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
VRK2Q86Y07 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VRK2Q86Y07 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.84■□□□□ 0.61
VRK2Q86Y07 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VRK2Q86Y07 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.84■□□□□ 0.61
VRK2Q86Y07 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VRK2Q86Y07 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VRK2Q86Y07 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.84■□□□□ 0.61
VRK2Q86Y07 MIR6821-201ENST00000617625 74 ntBASIC18.84■□□□□ 0.61
VRK2Q86Y07 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VRK2Q86Y07 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VRK2Q86Y07 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VRK2Q86Y07 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VRK2Q86Y07 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.84■□□□□ 0.61
VRK2Q86Y07 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
VRK2Q86Y07 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
VRK2Q86Y07 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.84■□□□□ 0.61
VRK2Q86Y07 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
VRK2Q86Y07 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VRK2Q86Y07 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
VRK2Q86Y07 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VRK2Q86Y07 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
VRK2Q86Y07 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
VRK2Q86Y07 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.84■□□□□ 0.61
VRK2Q86Y07 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.84■□□□□ 0.61
VRK2Q86Y07 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
VRK2Q86Y07 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms