Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HIST3H2AQ7L7L0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HIST3H2AQ7L7L0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.56■□□□□ 0.56
HIST3H2AQ7L7L0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIST3H2AQ7L7L0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
HIST3H2AQ7L7L0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HIST3H2AQ7L7L0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIST3H2AQ7L7L0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIST3H2AQ7L7L0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HIST3H2AQ7L7L0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HIST3H2AQ7L7L0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIST3H2AQ7L7L0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
HIST3H2AQ7L7L0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIST3H2AQ7L7L0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIST3H2AQ7L7L0 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIST3H2AQ7L7L0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIST3H2AQ7L7L0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIST3H2AQ7L7L0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
HIST3H2AQ7L7L0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIST3H2AQ7L7L0 GABARAPL3-202ENST00000624044 1851 ntBASIC18.55■□□□□ 0.56
HIST3H2AQ7L7L0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
HIST3H2AQ7L7L0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIST3H2AQ7L7L0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIST3H2AQ7L7L0 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIST3H2AQ7L7L0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.55■□□□□ 0.56
HIST3H2AQ7L7L0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIST3H2AQ7L7L0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIST3H2AQ7L7L0 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HIST3H2AQ7L7L0 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HIST3H2AQ7L7L0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.55■□□□□ 0.56
HIST3H2AQ7L7L0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIST3H2AQ7L7L0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
HIST3H2AQ7L7L0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.55■□□□□ 0.56
HIST3H2AQ7L7L0 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIST3H2AQ7L7L0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
HIST3H2AQ7L7L0 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIST3H2AQ7L7L0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
HIST3H2AQ7L7L0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.55■□□□□ 0.56
HIST3H2AQ7L7L0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.54■□□□□ 0.56
HIST3H2AQ7L7L0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.54■□□□□ 0.56
HIST3H2AQ7L7L0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HIST3H2AQ7L7L0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.54■□□□□ 0.56
HIST3H2AQ7L7L0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST3H2AQ7L7L0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HIST3H2AQ7L7L0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST3H2AQ7L7L0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HIST3H2AQ7L7L0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HIST3H2AQ7L7L0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST3H2AQ7L7L0 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
HIST3H2AQ7L7L0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.54■□□□□ 0.56
HIST3H2AQ7L7L0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HIST3H2AQ7L7L0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.54■□□□□ 0.56
HIST3H2AQ7L7L0 SLC7A5P1-201ENST00000568957 537 ntBASIC18.54■□□□□ 0.56
HIST3H2AQ7L7L0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST3H2AQ7L7L0 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.54■□□□□ 0.56
HIST3H2AQ7L7L0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST3H2AQ7L7L0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.54■□□□□ 0.56
HIST3H2AQ7L7L0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HIST3H2AQ7L7L0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST3H2AQ7L7L0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST3H2AQ7L7L0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST3H2AQ7L7L0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST3H2AQ7L7L0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST3H2AQ7L7L0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.54■□□□□ 0.56
HIST3H2AQ7L7L0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST3H2AQ7L7L0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST3H2AQ7L7L0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.54■□□□□ 0.56
HIST3H2AQ7L7L0 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.53■□□□□ 0.56
HIST3H2AQ7L7L0 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HIST3H2AQ7L7L0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
HIST3H2AQ7L7L0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HIST3H2AQ7L7L0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HIST3H2AQ7L7L0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
HIST3H2AQ7L7L0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HIST3H2AQ7L7L0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.53■□□□□ 0.56
HIST3H2AQ7L7L0 AC034268.1-201ENST00000441047 882 ntBASIC18.53■□□□□ 0.56
HIST3H2AQ7L7L0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.53■□□□□ 0.56
HIST3H2AQ7L7L0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HIST3H2AQ7L7L0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HIST3H2AQ7L7L0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.53■□□□□ 0.56
HIST3H2AQ7L7L0 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.53■□□□□ 0.56
HIST3H2AQ7L7L0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HIST3H2AQ7L7L0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.52■□□□□ 0.56
HIST3H2AQ7L7L0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.52■□□□□ 0.56
HIST3H2AQ7L7L0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
HIST3H2AQ7L7L0 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.52■□□□□ 0.56
HIST3H2AQ7L7L0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
HIST3H2AQ7L7L0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HIST3H2AQ7L7L0 AP005212.1-201ENST00000581547 1997 ntBASIC18.52■□□□□ 0.56
HIST3H2AQ7L7L0 AC073314.1-201ENST00000568729 2216 ntBASIC18.52■□□□□ 0.56
HIST3H2AQ7L7L0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
HIST3H2AQ7L7L0 NTF6G-201ENST00000591094 616 ntBASIC18.52■□□□□ 0.56
HIST3H2AQ7L7L0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.52■□□□□ 0.56
HIST3H2AQ7L7L0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
HIST3H2AQ7L7L0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.52■□□□□ 0.56
HIST3H2AQ7L7L0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HIST3H2AQ7L7L0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HIST3H2AQ7L7L0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
HIST3H2AQ7L7L0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.52■□□□□ 0.55
HIST3H2AQ7L7L0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms