Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBA1AQ71U36 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBA1AQ71U36 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TUBA1AQ71U36 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TUBA1AQ71U36 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TUBA1AQ71U36 KRT18P14-201ENST00000534205 1250 ntBASIC18.75■□□□□ 0.59
TUBA1AQ71U36 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TUBA1AQ71U36 DUX4L2-201ENST00000561772 1275 ntBASIC18.75■□□□□ 0.59
TUBA1AQ71U36 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.75■□□□□ 0.59
TUBA1AQ71U36 DUX4L6-201ENST00000626483 1275 ntBASIC18.75■□□□□ 0.59
TUBA1AQ71U36 DUX4L1-201ENST00000627662 1275 ntBASIC18.75■□□□□ 0.59
TUBA1AQ71U36 DUX4L8-201ENST00000629013 1275 ntBASIC18.75■□□□□ 0.59
TUBA1AQ71U36 DUX4L3-201ENST00000630187 1275 ntBASIC18.75■□□□□ 0.59
TUBA1AQ71U36 DUX4L7-201ENST00000630678 1275 ntBASIC18.75■□□□□ 0.59
TUBA1AQ71U36 DUX4L5-201ENST00000630834 1275 ntBASIC18.75■□□□□ 0.59
TUBA1AQ71U36 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBA1AQ71U36 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TUBA1AQ71U36 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
TUBA1AQ71U36 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.75■□□□□ 0.59
TUBA1AQ71U36 AC005224.4-201ENST00000583262 1652 ntBASIC18.75■□□□□ 0.59
TUBA1AQ71U36 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBA1AQ71U36 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.75■□□□□ 0.59
TUBA1AQ71U36 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TUBA1AQ71U36 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TUBA1AQ71U36 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TUBA1AQ71U36 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBA1AQ71U36 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBA1AQ71U36 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.74■□□□□ 0.59
TUBA1AQ71U36 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBA1AQ71U36 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBA1AQ71U36 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBA1AQ71U36 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TUBA1AQ71U36 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TUBA1AQ71U36 MIR5787-201ENST00000611784 55 ntBASIC18.74■□□□□ 0.59
TUBA1AQ71U36 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.74■□□□□ 0.59
TUBA1AQ71U36 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TUBA1AQ71U36 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.74■□□□□ 0.59
TUBA1AQ71U36 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBA1AQ71U36 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.74■□□□□ 0.59
TUBA1AQ71U36 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBA1AQ71U36 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBA1AQ71U36 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TUBA1AQ71U36 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.74■□□□□ 0.59
TUBA1AQ71U36 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBA1AQ71U36 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBA1AQ71U36 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBA1AQ71U36 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBA1AQ71U36 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TUBA1AQ71U36 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBA1AQ71U36 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TUBA1AQ71U36 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.73■□□□□ 0.59
TUBA1AQ71U36 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBA1AQ71U36 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TUBA1AQ71U36 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TUBA1AQ71U36 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TUBA1AQ71U36 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.73■□□□□ 0.59
TUBA1AQ71U36 TERF1P2-201ENST00000583350 1212 ntBASIC18.73■□□□□ 0.59
TUBA1AQ71U36 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TUBA1AQ71U36 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.73■□□□□ 0.59
TUBA1AQ71U36 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBA1AQ71U36 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBA1AQ71U36 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.73■□□□□ 0.59
TUBA1AQ71U36 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.73■□□□□ 0.59
TUBA1AQ71U36 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBA1AQ71U36 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBA1AQ71U36 AC009237.3-201ENST00000393279 1427 ntBASIC18.73■□□□□ 0.59
TUBA1AQ71U36 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TUBA1AQ71U36 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TUBA1AQ71U36 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.73■□□□□ 0.59
TUBA1AQ71U36 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TUBA1AQ71U36 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TUBA1AQ71U36 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TUBA1AQ71U36 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TUBA1AQ71U36 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.72■□□□□ 0.59
TUBA1AQ71U36 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.72■□□□□ 0.59
TUBA1AQ71U36 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TUBA1AQ71U36 AC020907.5-201ENST00000624372 1936 ntBASIC18.72■□□□□ 0.59
TUBA1AQ71U36 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBA1AQ71U36 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TUBA1AQ71U36 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBA1AQ71U36 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBA1AQ71U36 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBA1AQ71U36 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.72■□□□□ 0.59
TUBA1AQ71U36 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBA1AQ71U36 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TUBA1AQ71U36 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
TUBA1AQ71U36 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TUBA1AQ71U36 AL034346.1-201ENST00000568244 1277 ntBASIC18.72■□□□□ 0.59
TUBA1AQ71U36 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TUBA1AQ71U36 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.72■□□□□ 0.59
TUBA1AQ71U36 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TUBA1AQ71U36 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBA1AQ71U36 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TUBA1AQ71U36 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.72■□□□□ 0.59
TUBA1AQ71U36 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBA1AQ71U36 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.72■□□□□ 0.59
TUBA1AQ71U36 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TUBA1AQ71U36 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TUBA1AQ71U36 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TUBA1AQ71U36 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms