Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC141Q6ZP82 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC141Q6ZP82 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC141Q6ZP82 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC141Q6ZP82 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC30.75■■■□□ 2.51
CCDC141Q6ZP82 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC30.75■■■□□ 2.51
CCDC141Q6ZP82 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC30.75■■■□□ 2.51
CCDC141Q6ZP82 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC30.75■■■□□ 2.51
CCDC141Q6ZP82 AL355075.4-201ENST00000554988 638 ntBASIC30.75■■■□□ 2.51
CCDC141Q6ZP82 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC30.75■■■□□ 2.51
CCDC141Q6ZP82 SNX21-213ENST00000614929 587 ntTSL 5 BASIC30.75■■■□□ 2.51
CCDC141Q6ZP82 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC30.75■■■□□ 2.51
CCDC141Q6ZP82 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC141Q6ZP82 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC30.74■■■□□ 2.51
CCDC141Q6ZP82 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CCDC141Q6ZP82 ECEL1P1-201ENST00000373592 1742 ntBASIC30.74■■■□□ 2.51
CCDC141Q6ZP82 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CCDC141Q6ZP82 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CCDC141Q6ZP82 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC30.74■■■□□ 2.51
CCDC141Q6ZP82 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC30.74■■■□□ 2.51
CCDC141Q6ZP82 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC30.74■■■□□ 2.51
CCDC141Q6ZP82 PENK-204ENST00000518770 863 ntTSL 2 BASIC30.74■■■□□ 2.51
CCDC141Q6ZP82 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC30.74■■■□□ 2.51
CCDC141Q6ZP82 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC30.74■■■□□ 2.51
CCDC141Q6ZP82 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
CCDC141Q6ZP82 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
CCDC141Q6ZP82 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
CCDC141Q6ZP82 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CCDC141Q6ZP82 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CCDC141Q6ZP82 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CCDC141Q6ZP82 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CCDC141Q6ZP82 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CCDC141Q6ZP82 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC30.73■■■□□ 2.51
CCDC141Q6ZP82 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
CCDC141Q6ZP82 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CCDC141Q6ZP82 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CCDC141Q6ZP82 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC30.73■■■□□ 2.51
CCDC141Q6ZP82 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CCDC141Q6ZP82 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC30.72■■■□□ 2.51
CCDC141Q6ZP82 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CCDC141Q6ZP82 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CCDC141Q6ZP82 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CCDC141Q6ZP82 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC30.72■■■□□ 2.51
CCDC141Q6ZP82 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC30.72■■■□□ 2.51
CCDC141Q6ZP82 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC30.72■■■□□ 2.51
CCDC141Q6ZP82 Six3os1_6.1-201ENST00000620790 196 ntBASIC30.72■■■□□ 2.51
CCDC141Q6ZP82 CABP2-204ENST00000636477 941 ntTSL 5 BASIC30.72■■■□□ 2.51
CCDC141Q6ZP82 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
CCDC141Q6ZP82 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC30.72■■■□□ 2.51
CCDC141Q6ZP82 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC30.72■■■□□ 2.51
CCDC141Q6ZP82 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CCDC141Q6ZP82 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CCDC141Q6ZP82 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CCDC141Q6ZP82 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CCDC141Q6ZP82 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC30.71■■■□□ 2.51
CCDC141Q6ZP82 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CCDC141Q6ZP82 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CCDC141Q6ZP82 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC30.71■■■□□ 2.51
CCDC141Q6ZP82 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC30.71■■■□□ 2.51
CCDC141Q6ZP82 PRKY-204ENST00000533551 1019 ntBASIC30.71■■■□□ 2.51
CCDC141Q6ZP82 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC30.71■■■□□ 2.51
CCDC141Q6ZP82 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
CCDC141Q6ZP82 AP001412.1-201ENST00000608405 714 ntBASIC30.71■■■□□ 2.51
CCDC141Q6ZP82 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CCDC141Q6ZP82 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CCDC141Q6ZP82 KRT17P2-201ENST00000300992 1314 ntBASIC30.71■■■□□ 2.51
CCDC141Q6ZP82 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CCDC141Q6ZP82 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
CCDC141Q6ZP82 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CCDC141Q6ZP82 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
CCDC141Q6ZP82 AC087499.1-201ENST00000418141 1075 ntBASIC30.7■■■□□ 2.51
CCDC141Q6ZP82 TSPY15P-201ENST00000457163 923 ntBASIC30.7■■■□□ 2.51
CCDC141Q6ZP82 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC30.7■■■□□ 2.51
CCDC141Q6ZP82 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC30.7■■■□□ 2.51
CCDC141Q6ZP82 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CCDC141Q6ZP82 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC30.7■■■□□ 2.51
CCDC141Q6ZP82 REXO1L12P-201ENST00000622156 912 ntBASIC30.7■■■□□ 2.51
CCDC141Q6ZP82 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CCDC141Q6ZP82 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
CCDC141Q6ZP82 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC30.7■■■□□ 2.51
CCDC141Q6ZP82 PALM-207ENST00000590161 2137 ntTSL 4 BASIC30.7■■■□□ 2.5
CCDC141Q6ZP82 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
CCDC141Q6ZP82 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.5
CCDC141Q6ZP82 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.5
CCDC141Q6ZP82 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.5
CCDC141Q6ZP82 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC30.7■■■□□ 2.5
CCDC141Q6ZP82 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
CCDC141Q6ZP82 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC30.7■■■□□ 2.5
CCDC141Q6ZP82 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC30.7■■■□□ 2.5
CCDC141Q6ZP82 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC30.69■■■□□ 2.5
CCDC141Q6ZP82 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CCDC141Q6ZP82 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CCDC141Q6ZP82 PARN-205ENST00000539279 1557 ntTSL 2 BASIC30.69■■■□□ 2.5
CCDC141Q6ZP82 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
CCDC141Q6ZP82 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC30.69■■■□□ 2.5
CCDC141Q6ZP82 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CCDC141Q6ZP82 AC233723.2-201ENST00000623798 2106 ntBASIC30.69■■■□□ 2.5
CCDC141Q6ZP82 GRAP-204ENST00000573099 846 ntTSL 3 BASIC30.69■■■□□ 2.5
CCDC141Q6ZP82 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC30.69■■■□□ 2.5
CCDC141Q6ZP82 AC012306.2-201ENST00000609350 630 ntBASIC30.69■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms