Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
CD109Q6YHK3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CD109Q6YHK3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC31.44■■■□□ 2.62
CD109Q6YHK3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC31.44■■■□□ 2.62
CD109Q6YHK3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC31.44■■■□□ 2.62
CD109Q6YHK3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
CD109Q6YHK3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
CD109Q6YHK3 AC006011.2-201ENST00000621313 1158 ntBASIC31.44■■■□□ 2.62
CD109Q6YHK3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
CD109Q6YHK3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC31.43■■■□□ 2.62
CD109Q6YHK3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC31.43■■■□□ 2.62
CD109Q6YHK3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CD109Q6YHK3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC31.43■■■□□ 2.62
CD109Q6YHK3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC31.43■■■□□ 2.62
CD109Q6YHK3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC31.43■■■□□ 2.62
CD109Q6YHK3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CD109Q6YHK3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC31.43■■■□□ 2.62
CD109Q6YHK3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CD109Q6YHK3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC31.43■■■□□ 2.62
CD109Q6YHK3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
CD109Q6YHK3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
CD109Q6YHK3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC31.42■■■□□ 2.62
CD109Q6YHK3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC31.42■■■□□ 2.62
CD109Q6YHK3 F2R-202ENST00000505600 442 ntTSL 2 BASIC31.42■■■□□ 2.62
CD109Q6YHK3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC31.42■■■□□ 2.62
CD109Q6YHK3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC31.42■■■□□ 2.62
CD109Q6YHK3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CD109Q6YHK3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CD109Q6YHK3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CD109Q6YHK3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
CD109Q6YHK3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CD109Q6YHK3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CD109Q6YHK3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC31.41■■■□□ 2.62
CD109Q6YHK3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC31.41■■■□□ 2.62
CD109Q6YHK3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CD109Q6YHK3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CD109Q6YHK3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CD109Q6YHK3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
CD109Q6YHK3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CD109Q6YHK3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC31.41■■■□□ 2.62
CD109Q6YHK3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CD109Q6YHK3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CD109Q6YHK3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
CD109Q6YHK3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CD109Q6YHK3 AC116562.2-201ENST00000507042 360 ntBASIC31.41■■■□□ 2.62
CD109Q6YHK3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC31.41■■■□□ 2.62
CD109Q6YHK3 AC010203.1-204ENST00000548782 407 ntBASIC31.41■■■□□ 2.62
CD109Q6YHK3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CD109Q6YHK3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
CD109Q6YHK3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC31.4■■■□□ 2.62
CD109Q6YHK3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC31.4■■■□□ 2.62
CD109Q6YHK3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC31.4■■■□□ 2.62
CD109Q6YHK3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CD109Q6YHK3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CD109Q6YHK3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CD109Q6YHK3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC31.4■■■□□ 2.62
CD109Q6YHK3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC31.4■■■□□ 2.62
CD109Q6YHK3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CD109Q6YHK3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CD109Q6YHK3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC31.39■■■□□ 2.62
CD109Q6YHK3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC31.39■■■□□ 2.62
CD109Q6YHK3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC31.39■■■□□ 2.62
CD109Q6YHK3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC31.39■■■□□ 2.62
CD109Q6YHK3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC31.39■■■□□ 2.62
CD109Q6YHK3 AL121894.2-201ENST00000602977 491 ntBASIC31.39■■■□□ 2.62
CD109Q6YHK3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CD109Q6YHK3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC31.39■■■□□ 2.61
CD109Q6YHK3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CD109Q6YHK3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CD109Q6YHK3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CD109Q6YHK3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC31.38■■■□□ 2.61
CD109Q6YHK3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC31.38■■■□□ 2.61
CD109Q6YHK3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC31.38■■■□□ 2.61
CD109Q6YHK3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
CD109Q6YHK3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CD109Q6YHK3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CD109Q6YHK3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC31.37■■■□□ 2.61
CD109Q6YHK3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CD109Q6YHK3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC31.37■■■□□ 2.61
CD109Q6YHK3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CD109Q6YHK3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC31.37■■■□□ 2.61
CD109Q6YHK3 NMU-205ENST00000511469 756 ntTSL 3 BASIC31.37■■■□□ 2.61
CD109Q6YHK3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CD109Q6YHK3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC31.37■■■□□ 2.61
CD109Q6YHK3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
CD109Q6YHK3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC31.37■■■□□ 2.61
CD109Q6YHK3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC31.37■■■□□ 2.61
CD109Q6YHK3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CD109Q6YHK3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC31.37■■■□□ 2.61
CD109Q6YHK3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
CD109Q6YHK3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CD109Q6YHK3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CD109Q6YHK3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CD109Q6YHK3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC31.36■■■□□ 2.61
CD109Q6YHK3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CD109Q6YHK3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CD109Q6YHK3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
CD109Q6YHK3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
CD109Q6YHK3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CD109Q6YHK3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC31.35■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms