Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
C11orf88Q6PI97 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C11orf88Q6PI97 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
C11orf88Q6PI97 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C11orf88Q6PI97 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C11orf88Q6PI97 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C11orf88Q6PI97 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.7■□□□□ 0.42
C11orf88Q6PI97 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C11orf88Q6PI97 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
C11orf88Q6PI97 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
C11orf88Q6PI97 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C11orf88Q6PI97 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C11orf88Q6PI97 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
C11orf88Q6PI97 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.69■□□□□ 0.42
C11orf88Q6PI97 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.69■□□□□ 0.42
C11orf88Q6PI97 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
C11orf88Q6PI97 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
C11orf88Q6PI97 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.69■□□□□ 0.42
C11orf88Q6PI97 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.69■□□□□ 0.42
C11orf88Q6PI97 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
C11orf88Q6PI97 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.69■□□□□ 0.42
C11orf88Q6PI97 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C11orf88Q6PI97 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
C11orf88Q6PI97 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C11orf88Q6PI97 OR7E47P-201ENST00000546390 1422 ntBASIC17.69■□□□□ 0.42
C11orf88Q6PI97 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.69■□□□□ 0.42
C11orf88Q6PI97 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
C11orf88Q6PI97 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C11orf88Q6PI97 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
C11orf88Q6PI97 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C11orf88Q6PI97 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C11orf88Q6PI97 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.68■□□□□ 0.42
C11orf88Q6PI97 AC026471.6-201ENST00000622954 1905 ntBASIC17.68■□□□□ 0.42
C11orf88Q6PI97 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C11orf88Q6PI97 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
C11orf88Q6PI97 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C11orf88Q6PI97 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
C11orf88Q6PI97 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C11orf88Q6PI97 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
C11orf88Q6PI97 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C11orf88Q6PI97 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.68■□□□□ 0.42
C11orf88Q6PI97 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.68■□□□□ 0.42
C11orf88Q6PI97 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C11orf88Q6PI97 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C11orf88Q6PI97 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
C11orf88Q6PI97 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
C11orf88Q6PI97 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C11orf88Q6PI97 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.68■□□□□ 0.42
C11orf88Q6PI97 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C11orf88Q6PI97 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.68■□□□□ 0.42
C11orf88Q6PI97 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.68■□□□□ 0.42
C11orf88Q6PI97 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
C11orf88Q6PI97 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
C11orf88Q6PI97 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C11orf88Q6PI97 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.68■□□□□ 0.42
C11orf88Q6PI97 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
C11orf88Q6PI97 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.68■□□□□ 0.42
C11orf88Q6PI97 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
C11orf88Q6PI97 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
C11orf88Q6PI97 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C11orf88Q6PI97 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
C11orf88Q6PI97 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C11orf88Q6PI97 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.67■□□□□ 0.42
C11orf88Q6PI97 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
C11orf88Q6PI97 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.67■□□□□ 0.42
C11orf88Q6PI97 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
C11orf88Q6PI97 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C11orf88Q6PI97 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.67■□□□□ 0.42
C11orf88Q6PI97 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C11orf88Q6PI97 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
C11orf88Q6PI97 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.67■□□□□ 0.42
C11orf88Q6PI97 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.67■□□□□ 0.42
C11orf88Q6PI97 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
C11orf88Q6PI97 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C11orf88Q6PI97 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C11orf88Q6PI97 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
C11orf88Q6PI97 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
C11orf88Q6PI97 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C11orf88Q6PI97 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
C11orf88Q6PI97 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C11orf88Q6PI97 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C11orf88Q6PI97 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
C11orf88Q6PI97 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
C11orf88Q6PI97 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.66■□□□□ 0.42
C11orf88Q6PI97 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.66■□□□□ 0.42
C11orf88Q6PI97 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
C11orf88Q6PI97 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C11orf88Q6PI97 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.66■□□□□ 0.42
C11orf88Q6PI97 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
C11orf88Q6PI97 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.66■□□□□ 0.42
C11orf88Q6PI97 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.66■□□□□ 0.42
C11orf88Q6PI97 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.66■□□□□ 0.42
C11orf88Q6PI97 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.66■□□□□ 0.42
C11orf88Q6PI97 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.66■□□□□ 0.42
C11orf88Q6PI97 AC092666.2-201ENST00000613287 246 ntBASIC17.66■□□□□ 0.42
C11orf88Q6PI97 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.66■□□□□ 0.42
C11orf88Q6PI97 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C11orf88Q6PI97 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.66■□□□□ 0.42
C11orf88Q6PI97 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C11orf88Q6PI97 AC133637.1-201ENST00000624115 1537 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms