Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CASC4Q6P4E1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.77■□□□□ 0.92
CASC4Q6P4E1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.77■□□□□ 0.92
CASC4Q6P4E1 KRT18P14-201ENST00000534205 1250 ntBASIC20.77■□□□□ 0.92
CASC4Q6P4E1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CASC4Q6P4E1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CASC4Q6P4E1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CASC4Q6P4E1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
CASC4Q6P4E1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.77■□□□□ 0.92
CASC4Q6P4E1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CASC4Q6P4E1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CASC4Q6P4E1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CASC4Q6P4E1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.77■□□□□ 0.91
CASC4Q6P4E1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CASC4Q6P4E1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
CASC4Q6P4E1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CASC4Q6P4E1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CASC4Q6P4E1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CASC4Q6P4E1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.76■□□□□ 0.91
CASC4Q6P4E1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CASC4Q6P4E1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CASC4Q6P4E1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CASC4Q6P4E1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CASC4Q6P4E1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.76■□□□□ 0.91
CASC4Q6P4E1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.76■□□□□ 0.91
CASC4Q6P4E1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CASC4Q6P4E1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CASC4Q6P4E1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.76■□□□□ 0.91
CASC4Q6P4E1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CASC4Q6P4E1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CASC4Q6P4E1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.76■□□□□ 0.91
CASC4Q6P4E1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CASC4Q6P4E1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CASC4Q6P4E1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.76■□□□□ 0.91
CASC4Q6P4E1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CASC4Q6P4E1 AL121603.2-201ENST00000557373 2117 ntBASIC20.75■□□□□ 0.91
CASC4Q6P4E1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASC4Q6P4E1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASC4Q6P4E1 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.75■□□□□ 0.91
CASC4Q6P4E1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASC4Q6P4E1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASC4Q6P4E1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.75■□□□□ 0.91
CASC4Q6P4E1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASC4Q6P4E1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.75■□□□□ 0.91
CASC4Q6P4E1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CASC4Q6P4E1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASC4Q6P4E1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CASC4Q6P4E1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CASC4Q6P4E1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.75■□□□□ 0.91
CASC4Q6P4E1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.75■□□□□ 0.91
CASC4Q6P4E1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.75■□□□□ 0.91
CASC4Q6P4E1 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASC4Q6P4E1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASC4Q6P4E1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASC4Q6P4E1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASC4Q6P4E1 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CASC4Q6P4E1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASC4Q6P4E1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASC4Q6P4E1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASC4Q6P4E1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.75■□□□□ 0.91
CASC4Q6P4E1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CASC4Q6P4E1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASC4Q6P4E1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CASC4Q6P4E1 AC116050.2-201ENST00000612102 1779 ntBASIC20.74■□□□□ 0.91
CASC4Q6P4E1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CASC4Q6P4E1 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CASC4Q6P4E1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CASC4Q6P4E1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CASC4Q6P4E1 ZNRF2P3-201ENST00000424200 374 ntBASIC20.74■□□□□ 0.91
CASC4Q6P4E1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.74■□□□□ 0.91
CASC4Q6P4E1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CASC4Q6P4E1 AL512408.1-201ENST00000569378 2000 ntBASIC20.74■□□□□ 0.91
CASC4Q6P4E1 AC004854.2-201ENST00000608450 1441 ntBASIC20.74■□□□□ 0.91
CASC4Q6P4E1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.74■□□□□ 0.91
CASC4Q6P4E1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.74■□□□□ 0.91
CASC4Q6P4E1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CASC4Q6P4E1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.73■□□□□ 0.91
CASC4Q6P4E1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.73■□□□□ 0.91
CASC4Q6P4E1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CASC4Q6P4E1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CASC4Q6P4E1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CASC4Q6P4E1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CASC4Q6P4E1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.73■□□□□ 0.91
CASC4Q6P4E1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.73■□□□□ 0.91
CASC4Q6P4E1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.73■□□□□ 0.91
CASC4Q6P4E1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.73■□□□□ 0.91
CASC4Q6P4E1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.73■□□□□ 0.91
CASC4Q6P4E1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
CASC4Q6P4E1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CASC4Q6P4E1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.73■□□□□ 0.91
CASC4Q6P4E1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CASC4Q6P4E1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CASC4Q6P4E1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CASC4Q6P4E1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CASC4Q6P4E1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CASC4Q6P4E1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CASC4Q6P4E1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CASC4Q6P4E1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CASC4Q6P4E1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CASC4Q6P4E1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms