Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC15.42■□□□□ 0.06
MRPL54Q6P161 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MRPL54Q6P161 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
MRPL54Q6P161 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MRPL54Q6P161 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
MRPL54Q6P161 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
MRPL54Q6P161 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
MRPL54Q6P161 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MRPL54Q6P161 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
MRPL54Q6P161 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MRPL54Q6P161 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MRPL54Q6P161 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MRPL54Q6P161 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MRPL54Q6P161 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MRPL54Q6P161 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
MRPL54Q6P161 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MRPL54Q6P161 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.41■□□□□ 0.06
MRPL54Q6P161 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MRPL54Q6P161 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC15.41■□□□□ 0.06
MRPL54Q6P161 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MRPL54Q6P161 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC15.41■□□□□ 0.06
MRPL54Q6P161 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MRPL54Q6P161 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC15.41■□□□□ 0.06
MRPL54Q6P161 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
MRPL54Q6P161 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MRPL54Q6P161 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MRPL54Q6P161 AP004607.7-201ENST00000527152 1677 ntBASIC15.41■□□□□ 0.06
MRPL54Q6P161 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
MRPL54Q6P161 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MRPL54Q6P161 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
MRPL54Q6P161 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
MRPL54Q6P161 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
MRPL54Q6P161 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MRPL54Q6P161 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
MRPL54Q6P161 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
MRPL54Q6P161 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MRPL54Q6P161 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MRPL54Q6P161 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
MRPL54Q6P161 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
MRPL54Q6P161 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MRPL54Q6P161 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
MRPL54Q6P161 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC15.4■□□□□ 0.06
MRPL54Q6P161 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.4■□□□□ 0.06
MRPL54Q6P161 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MRPL54Q6P161 IDNK-201ENST00000376417 511 ntTSL 5 BASIC15.4■□□□□ 0.06
MRPL54Q6P161 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MRPL54Q6P161 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC15.4■□□□□ 0.06
MRPL54Q6P161 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MRPL54Q6P161 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC15.4■□□□□ 0.06
MRPL54Q6P161 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
MRPL54Q6P161 BHLHE23-202ENST00000612929 1109 ntBASIC15.4■□□□□ 0.06
MRPL54Q6P161 MIR6722-201ENST00000617286 78 ntBASIC15.4■□□□□ 0.06
MRPL54Q6P161 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.4■□□□□ 0.06
MRPL54Q6P161 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
MRPL54Q6P161 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC15.4■□□□□ 0.06
MRPL54Q6P161 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
MRPL54Q6P161 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
MRPL54Q6P161 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MRPL54Q6P161 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MRPL54Q6P161 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
MRPL54Q6P161 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MRPL54Q6P161 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MRPL54Q6P161 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MRPL54Q6P161 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MRPL54Q6P161 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MRPL54Q6P161 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
MRPL54Q6P161 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.39■□□□□ 0.05
MRPL54Q6P161 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
MRPL54Q6P161 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC15.39■□□□□ 0.05
MRPL54Q6P161 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MRPL54Q6P161 SENP5-202ENST00000419026 973 ntTSL 3 BASIC15.39■□□□□ 0.05
MRPL54Q6P161 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC15.39■□□□□ 0.05
MRPL54Q6P161 DUX4L18-201ENST00000553347 1267 ntBASIC15.39■□□□□ 0.05
MRPL54Q6P161 AL034346.1-201ENST00000568244 1277 ntBASIC15.39■□□□□ 0.05
MRPL54Q6P161 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC15.39■□□□□ 0.05
MRPL54Q6P161 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.39■□□□□ 0.05
MRPL54Q6P161 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
MRPL54Q6P161 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MRPL54Q6P161 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MRPL54Q6P161 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MRPL54Q6P161 AC125437.2-201ENST00000625180 2167 ntBASIC15.39■□□□□ 0.05
MRPL54Q6P161 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
MRPL54Q6P161 HTR7P1-202ENST00000624664 4411 ntBASIC15.39■□□□□ 0.05
MRPL54Q6P161 VGF-203ENST00000611537 1622 ntTSL 5 BASIC15.39■□□□□ 0.05
MRPL54Q6P161 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MRPL54Q6P161 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.39■□□□□ 0.05
MRPL54Q6P161 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MRPL54Q6P161 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MRPL54Q6P161 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MRPL54Q6P161 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MRPL54Q6P161 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.38■□□□□ 0.05
MRPL54Q6P161 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
MRPL54Q6P161 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
MRPL54Q6P161 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC15.38■□□□□ 0.05
MRPL54Q6P161 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MRPL54Q6P161 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MRPL54Q6P161 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MRPL54Q6P161 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MRPL54Q6P161 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
MRPL54Q6P161 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms