Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HIST2H2AA3Q6FI13 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HIST2H2AA3Q6FI13 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
HIST2H2AA3Q6FI13 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST2H2AA3Q6FI13 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HIST2H2AA3Q6FI13 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST2H2AA3Q6FI13 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
HIST2H2AA3Q6FI13 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
HIST2H2AA3Q6FI13 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST2H2AA3Q6FI13 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.7■□□□□ 0.74
HIST2H2AA3Q6FI13 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HIST2H2AA3Q6FI13 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.7■□□□□ 0.74
HIST2H2AA3Q6FI13 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.7■□□□□ 0.74
HIST2H2AA3Q6FI13 AC007322.4-201ENST00000509611 723 ntBASIC19.7■□□□□ 0.74
HIST2H2AA3Q6FI13 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HIST2H2AA3Q6FI13 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HIST2H2AA3Q6FI13 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.7■□□□□ 0.74
HIST2H2AA3Q6FI13 MFSD11-216ENST00000590393 1141 ntBASIC19.7■□□□□ 0.74
HIST2H2AA3Q6FI13 AC011767.1-201ENST00000617410 1153 ntBASIC19.7■□□□□ 0.74
HIST2H2AA3Q6FI13 BID-214ENST00000617586 542 ntTSL 5 BASIC19.7■□□□□ 0.74
HIST2H2AA3Q6FI13 MIR2861-201ENST00000636310 90 ntBASIC19.7■□□□□ 0.74
HIST2H2AA3Q6FI13 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST2H2AA3Q6FI13 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST2H2AA3Q6FI13 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST2H2AA3Q6FI13 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
HIST2H2AA3Q6FI13 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HIST2H2AA3Q6FI13 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST2H2AA3Q6FI13 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HIST2H2AA3Q6FI13 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST2H2AA3Q6FI13 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HIST2H2AA3Q6FI13 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.7■□□□□ 0.74
HIST2H2AA3Q6FI13 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.7■□□□□ 0.74
HIST2H2AA3Q6FI13 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST2H2AA3Q6FI13 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
HIST2H2AA3Q6FI13 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.69■□□□□ 0.74
HIST2H2AA3Q6FI13 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST2H2AA3Q6FI13 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.69■□□□□ 0.74
HIST2H2AA3Q6FI13 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HIST2H2AA3Q6FI13 LINC01521-201ENST00000504184 1943 ntBASIC19.69■□□□□ 0.74
HIST2H2AA3Q6FI13 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST2H2AA3Q6FI13 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST2H2AA3Q6FI13 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.69■□□□□ 0.74
HIST2H2AA3Q6FI13 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.69■□□□□ 0.74
HIST2H2AA3Q6FI13 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.69■□□□□ 0.74
HIST2H2AA3Q6FI13 AL162412.1-201ENST00000567129 965 ntBASIC19.69■□□□□ 0.74
HIST2H2AA3Q6FI13 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST2H2AA3Q6FI13 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST2H2AA3Q6FI13 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.69■□□□□ 0.74
HIST2H2AA3Q6FI13 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
HIST2H2AA3Q6FI13 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
HIST2H2AA3Q6FI13 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HIST2H2AA3Q6FI13 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST2H2AA3Q6FI13 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
HIST2H2AA3Q6FI13 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HIST2H2AA3Q6FI13 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST2H2AA3Q6FI13 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST2H2AA3Q6FI13 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
HIST2H2AA3Q6FI13 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST2H2AA3Q6FI13 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST2H2AA3Q6FI13 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST2H2AA3Q6FI13 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.68■□□□□ 0.74
HIST2H2AA3Q6FI13 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST2H2AA3Q6FI13 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.68■□□□□ 0.74
HIST2H2AA3Q6FI13 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.68■□□□□ 0.74
HIST2H2AA3Q6FI13 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.68■□□□□ 0.74
HIST2H2AA3Q6FI13 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.68■□□□□ 0.74
HIST2H2AA3Q6FI13 AC022517.1-201ENST00000592429 346 ntBASIC19.68■□□□□ 0.74
HIST2H2AA3Q6FI13 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HIST2H2AA3Q6FI13 GABARAPL3-202ENST00000624044 1851 ntBASIC19.68■□□□□ 0.74
HIST2H2AA3Q6FI13 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.68■□□□□ 0.74
HIST2H2AA3Q6FI13 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.68■□□□□ 0.74
HIST2H2AA3Q6FI13 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HIST2H2AA3Q6FI13 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HIST2H2AA3Q6FI13 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.68■□□□□ 0.74
HIST2H2AA3Q6FI13 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST2H2AA3Q6FI13 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST2H2AA3Q6FI13 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.68■□□□□ 0.74
HIST2H2AA3Q6FI13 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
HIST2H2AA3Q6FI13 AL157384.1-201ENST00000445995 2473 ntBASIC19.67■□□□□ 0.74
HIST2H2AA3Q6FI13 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST2H2AA3Q6FI13 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
HIST2H2AA3Q6FI13 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST2H2AA3Q6FI13 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST2H2AA3Q6FI13 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.67■□□□□ 0.74
HIST2H2AA3Q6FI13 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.67■□□□□ 0.74
HIST2H2AA3Q6FI13 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST2H2AA3Q6FI13 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST2H2AA3Q6FI13 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST2H2AA3Q6FI13 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST2H2AA3Q6FI13 PGM5P4-201ENST00000421970 445 ntBASIC19.67■□□□□ 0.74
HIST2H2AA3Q6FI13 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.67■□□□□ 0.74
HIST2H2AA3Q6FI13 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.67■□□□□ 0.74
HIST2H2AA3Q6FI13 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.67■□□□□ 0.74
HIST2H2AA3Q6FI13 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.67■□□□□ 0.74
HIST2H2AA3Q6FI13 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST2H2AA3Q6FI13 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST2H2AA3Q6FI13 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HIST2H2AA3Q6FI13 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
HIST2H2AA3Q6FI13 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HIST2H2AA3Q6FI13 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms