Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
LYSMD4Q5XG99 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LYSMD4Q5XG99 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LYSMD4Q5XG99 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
LYSMD4Q5XG99 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.15■□□□□ 0.82
LYSMD4Q5XG99 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LYSMD4Q5XG99 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
LYSMD4Q5XG99 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.15■□□□□ 0.82
LYSMD4Q5XG99 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
LYSMD4Q5XG99 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.15■□□□□ 0.82
LYSMD4Q5XG99 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.15■□□□□ 0.82
LYSMD4Q5XG99 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.15■□□□□ 0.82
LYSMD4Q5XG99 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LYSMD4Q5XG99 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LYSMD4Q5XG99 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
LYSMD4Q5XG99 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LYSMD4Q5XG99 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LYSMD4Q5XG99 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.15■□□□□ 0.82
LYSMD4Q5XG99 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
LYSMD4Q5XG99 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
LYSMD4Q5XG99 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LYSMD4Q5XG99 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LYSMD4Q5XG99 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LYSMD4Q5XG99 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.15■□□□□ 0.82
LYSMD4Q5XG99 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LYSMD4Q5XG99 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LYSMD4Q5XG99 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
LYSMD4Q5XG99 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LYSMD4Q5XG99 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LYSMD4Q5XG99 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
LYSMD4Q5XG99 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LYSMD4Q5XG99 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LYSMD4Q5XG99 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LYSMD4Q5XG99 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
LYSMD4Q5XG99 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LYSMD4Q5XG99 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.14■□□□□ 0.81
LYSMD4Q5XG99 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.14■□□□□ 0.81
LYSMD4Q5XG99 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LYSMD4Q5XG99 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LYSMD4Q5XG99 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LYSMD4Q5XG99 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.14■□□□□ 0.81
LYSMD4Q5XG99 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LYSMD4Q5XG99 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.14■□□□□ 0.81
LYSMD4Q5XG99 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.14■□□□□ 0.81
LYSMD4Q5XG99 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LYSMD4Q5XG99 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LYSMD4Q5XG99 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LYSMD4Q5XG99 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LYSMD4Q5XG99 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LYSMD4Q5XG99 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LYSMD4Q5XG99 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LYSMD4Q5XG99 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.13■□□□□ 0.81
LYSMD4Q5XG99 AL355355.2-201ENST00000442321 338 ntBASIC20.13■□□□□ 0.81
LYSMD4Q5XG99 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
LYSMD4Q5XG99 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.13■□□□□ 0.81
LYSMD4Q5XG99 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.13■□□□□ 0.81
LYSMD4Q5XG99 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
LYSMD4Q5XG99 AP003071.4-201ENST00000562276 1284 ntBASIC20.13■□□□□ 0.81
LYSMD4Q5XG99 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
LYSMD4Q5XG99 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LYSMD4Q5XG99 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LYSMD4Q5XG99 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LYSMD4Q5XG99 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LYSMD4Q5XG99 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.13■□□□□ 0.81
LYSMD4Q5XG99 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LYSMD4Q5XG99 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LYSMD4Q5XG99 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
LYSMD4Q5XG99 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LYSMD4Q5XG99 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LYSMD4Q5XG99 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LYSMD4Q5XG99 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LYSMD4Q5XG99 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.12■□□□□ 0.81
LYSMD4Q5XG99 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.12■□□□□ 0.81
LYSMD4Q5XG99 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.12■□□□□ 0.81
LYSMD4Q5XG99 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.12■□□□□ 0.81
LYSMD4Q5XG99 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LYSMD4Q5XG99 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.12■□□□□ 0.81
LYSMD4Q5XG99 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.12■□□□□ 0.81
LYSMD4Q5XG99 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LYSMD4Q5XG99 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LYSMD4Q5XG99 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LYSMD4Q5XG99 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.12■□□□□ 0.81
LYSMD4Q5XG99 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.11■□□□□ 0.81
LYSMD4Q5XG99 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.11■□□□□ 0.81
LYSMD4Q5XG99 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LYSMD4Q5XG99 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LYSMD4Q5XG99 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LYSMD4Q5XG99 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LYSMD4Q5XG99 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
LYSMD4Q5XG99 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LYSMD4Q5XG99 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LYSMD4Q5XG99 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.11■□□□□ 0.81
LYSMD4Q5XG99 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LYSMD4Q5XG99 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.11■□□□□ 0.81
LYSMD4Q5XG99 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
LYSMD4Q5XG99 CD177P1-201ENST00000606252 935 ntBASIC20.11■□□□□ 0.81
LYSMD4Q5XG99 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LYSMD4Q5XG99 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
LYSMD4Q5XG99 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.11■□□□□ 0.81
LYSMD4Q5XG99 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms