Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
CCDC18Q5T9S5 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CCDC18Q5T9S5 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC31.79■■■□□ 2.68
CCDC18Q5T9S5 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC31.79■■■□□ 2.68
CCDC18Q5T9S5 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CCDC18Q5T9S5 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC31.79■■■□□ 2.68
CCDC18Q5T9S5 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC31.78■■■□□ 2.68
CCDC18Q5T9S5 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC31.78■■■□□ 2.68
CCDC18Q5T9S5 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC31.78■■■□□ 2.68
CCDC18Q5T9S5 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
CCDC18Q5T9S5 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CCDC18Q5T9S5 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC31.78■■■□□ 2.68
CCDC18Q5T9S5 DYM-203ENST00000442713 2147 ntTSL 2 BASIC31.78■■■□□ 2.68
CCDC18Q5T9S5 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CCDC18Q5T9S5 KRASP1-201ENST00000407852 552 ntBASIC31.78■■■□□ 2.68
CCDC18Q5T9S5 AL390719.1-204ENST00000412397 1219 ntBASIC31.78■■■□□ 2.68
CCDC18Q5T9S5 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC31.78■■■□□ 2.68
CCDC18Q5T9S5 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC31.78■■■□□ 2.68
CCDC18Q5T9S5 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC31.78■■■□□ 2.68
CCDC18Q5T9S5 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC31.77■■■□□ 2.68
CCDC18Q5T9S5 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CCDC18Q5T9S5 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC31.77■■■□□ 2.68
CCDC18Q5T9S5 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
CCDC18Q5T9S5 AC012676.1-201ENST00000574705 1949 ntBASIC31.77■■■□□ 2.68
CCDC18Q5T9S5 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC31.77■■■□□ 2.68
CCDC18Q5T9S5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC31.77■■■□□ 2.68
CCDC18Q5T9S5 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CCDC18Q5T9S5 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC31.77■■■□□ 2.68
CCDC18Q5T9S5 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CCDC18Q5T9S5 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CCDC18Q5T9S5 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CCDC18Q5T9S5 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC31.77■■■□□ 2.68
CCDC18Q5T9S5 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC31.77■■■□□ 2.68
CCDC18Q5T9S5 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.67
CCDC18Q5T9S5 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CCDC18Q5T9S5 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
CCDC18Q5T9S5 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC31.76■■■□□ 2.67
CCDC18Q5T9S5 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CCDC18Q5T9S5 MIR2861-201ENST00000636310 90 ntBASIC31.76■■■□□ 2.67
CCDC18Q5T9S5 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC31.76■■■□□ 2.67
CCDC18Q5T9S5 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
CCDC18Q5T9S5 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
CCDC18Q5T9S5 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CCDC18Q5T9S5 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
CCDC18Q5T9S5 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC31.75■■■□□ 2.67
CCDC18Q5T9S5 AC023632.3-201ENST00000521633 145 ntBASIC31.75■■■□□ 2.67
CCDC18Q5T9S5 DHDH-203ENST00000522614 776 ntTSL 5 BASIC31.75■■■□□ 2.67
CCDC18Q5T9S5 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
CCDC18Q5T9S5 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
CCDC18Q5T9S5 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC31.75■■■□□ 2.67
CCDC18Q5T9S5 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC31.75■■■□□ 2.67
CCDC18Q5T9S5 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CCDC18Q5T9S5 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC31.74■■■□□ 2.67
CCDC18Q5T9S5 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CCDC18Q5T9S5 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC31.74■■■□□ 2.67
CCDC18Q5T9S5 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC31.74■■■□□ 2.67
CCDC18Q5T9S5 THEM4-205ENST00000489410 643 ntTSL 2 BASIC31.74■■■□□ 2.67
CCDC18Q5T9S5 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CCDC18Q5T9S5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC31.74■■■□□ 2.67
CCDC18Q5T9S5 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CCDC18Q5T9S5 AC110285.5-201ENST00000611501 352 ntBASIC31.74■■■□□ 2.67
CCDC18Q5T9S5 AL049637.2-201ENST00000641778 930 ntBASIC31.74■■■□□ 2.67
CCDC18Q5T9S5 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CCDC18Q5T9S5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CCDC18Q5T9S5 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CCDC18Q5T9S5 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
CCDC18Q5T9S5 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
CCDC18Q5T9S5 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC31.73■■■□□ 2.67
CCDC18Q5T9S5 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC31.73■■■□□ 2.67
CCDC18Q5T9S5 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC31.73■■■□□ 2.67
CCDC18Q5T9S5 RARRES2P10-201ENST00000564312 460 ntBASIC31.73■■■□□ 2.67
CCDC18Q5T9S5 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC31.73■■■□□ 2.67
CCDC18Q5T9S5 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC31.73■■■□□ 2.67
CCDC18Q5T9S5 AC027702.1-201ENST00000563810 1770 ntBASIC31.73■■■□□ 2.67
CCDC18Q5T9S5 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CCDC18Q5T9S5 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC31.73■■■□□ 2.67
CCDC18Q5T9S5 KRT8P36-201ENST00000489121 1440 ntBASIC31.73■■■□□ 2.67
CCDC18Q5T9S5 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CCDC18Q5T9S5 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CCDC18Q5T9S5 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
CCDC18Q5T9S5 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC31.72■■■□□ 2.67
CCDC18Q5T9S5 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC31.72■■■□□ 2.67
CCDC18Q5T9S5 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CCDC18Q5T9S5 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CCDC18Q5T9S5 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC31.72■■■□□ 2.67
CCDC18Q5T9S5 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CCDC18Q5T9S5 AC133561.1-201ENST00000568600 2415 ntBASIC31.72■■■□□ 2.67
CCDC18Q5T9S5 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC31.72■■■□□ 2.67
CCDC18Q5T9S5 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CCDC18Q5T9S5 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
CCDC18Q5T9S5 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
CCDC18Q5T9S5 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CCDC18Q5T9S5 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
CCDC18Q5T9S5 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC31.72■■■□□ 2.67
CCDC18Q5T9S5 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
CCDC18Q5T9S5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CCDC18Q5T9S5 AL135905.2-201ENST00000584934 1404 ntBASIC31.71■■■□□ 2.67
CCDC18Q5T9S5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CCDC18Q5T9S5 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC31.71■■■□□ 2.67
CCDC18Q5T9S5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC31.71■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms