Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-BQ31612 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.95■□□□□ 0.78
HLA-BQ31612 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-BQ31612 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-BQ31612 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-BQ31612 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
HLA-BQ31612 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
HLA-BQ31612 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.94■□□□□ 0.78
HLA-BQ31612 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.94■□□□□ 0.78
HLA-BQ31612 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-BQ31612 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-BQ31612 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.94■□□□□ 0.78
HLA-BQ31612 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.94■□□□□ 0.78
HLA-BQ31612 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-BQ31612 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
HLA-BQ31612 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-BQ31612 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.94■□□□□ 0.78
HLA-BQ31612 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.94■□□□□ 0.78
HLA-BQ31612 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
HLA-BQ31612 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-BQ31612 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-BQ31612 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-BQ31612 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HLA-BQ31612 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
HLA-BQ31612 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
HLA-BQ31612 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.93■□□□□ 0.78
HLA-BQ31612 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-BQ31612 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-BQ31612 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-BQ31612 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-BQ31612 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-BQ31612 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.93■□□□□ 0.78
HLA-BQ31612 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-BQ31612 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-BQ31612 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-BQ31612 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-BQ31612 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
HLA-BQ31612 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.93■□□□□ 0.78
HLA-BQ31612 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.93■□□□□ 0.78
HLA-BQ31612 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
HLA-BQ31612 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-BQ31612 AC097493.4-201ENST00000641197 219 ntBASIC19.93■□□□□ 0.78
HLA-BQ31612 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
HLA-BQ31612 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HLA-BQ31612 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-BQ31612 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-BQ31612 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-BQ31612 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.92■□□□□ 0.78
HLA-BQ31612 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.92■□□□□ 0.78
HLA-BQ31612 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.92■□□□□ 0.78
HLA-BQ31612 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HLA-BQ31612 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-BQ31612 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.92■□□□□ 0.78
HLA-BQ31612 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
HLA-BQ31612 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-BQ31612 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HLA-BQ31612 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-BQ31612 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-BQ31612 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-BQ31612 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-BQ31612 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-BQ31612 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.91■□□□□ 0.78
HLA-BQ31612 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.91■□□□□ 0.78
HLA-BQ31612 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
HLA-BQ31612 AC012306.2-201ENST00000609350 630 ntBASIC19.91■□□□□ 0.78
HLA-BQ31612 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.91■□□□□ 0.78
HLA-BQ31612 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-BQ31612 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-BQ31612 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-BQ31612 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HLA-BQ31612 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
HLA-BQ31612 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.9■□□□□ 0.78
HLA-BQ31612 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-BQ31612 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.9■□□□□ 0.78
HLA-BQ31612 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.9■□□□□ 0.78
HLA-BQ31612 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.9■□□□□ 0.78
HLA-BQ31612 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.9■□□□□ 0.78
HLA-BQ31612 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.9■□□□□ 0.78
HLA-BQ31612 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-BQ31612 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-BQ31612 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-BQ31612 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-BQ31612 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-BQ31612 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
HLA-BQ31612 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-BQ31612 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-BQ31612 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-BQ31612 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-BQ31612 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-BQ31612 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
HLA-BQ31612 RCN1P1-201ENST00000400413 996 ntBASIC19.89■□□□□ 0.77
HLA-BQ31612 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-BQ31612 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
HLA-BQ31612 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.89■□□□□ 0.77
HLA-BQ31612 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.89■□□□□ 0.77
HLA-BQ31612 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-BQ31612 AC026471.5-201ENST00000615068 467 ntBASIC19.89■□□□□ 0.77
HLA-BQ31612 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-BQ31612 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.88■□□□□ 0.77
HLA-BQ31612 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms