Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
EFNB3Q15768 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
EFNB3Q15768 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.43■□□□□ 0.38
EFNB3Q15768 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.43■□□□□ 0.38
EFNB3Q15768 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.43■□□□□ 0.38
EFNB3Q15768 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFNB3Q15768 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFNB3Q15768 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFNB3Q15768 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFNB3Q15768 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFNB3Q15768 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
EFNB3Q15768 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.42■□□□□ 0.38
EFNB3Q15768 AP003097.1-201ENST00000530657 1135 ntBASIC17.42■□□□□ 0.38
EFNB3Q15768 PNMA6B-201ENST00000538162 1200 ntBASIC17.42■□□□□ 0.38
EFNB3Q15768 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.42■□□□□ 0.38
EFNB3Q15768 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
EFNB3Q15768 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EFNB3Q15768 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EFNB3Q15768 AL049796.1-201ENST00000565336 1766 ntBASIC17.42■□□□□ 0.38
EFNB3Q15768 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
EFNB3Q15768 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EFNB3Q15768 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
EFNB3Q15768 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFNB3Q15768 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.42■□□□□ 0.38
EFNB3Q15768 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.42■□□□□ 0.38
EFNB3Q15768 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
EFNB3Q15768 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFNB3Q15768 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFNB3Q15768 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
EFNB3Q15768 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFNB3Q15768 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
EFNB3Q15768 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
EFNB3Q15768 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFNB3Q15768 AC092368.3-202ENST00000574180 1591 ntBASIC17.41■□□□□ 0.38
EFNB3Q15768 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFNB3Q15768 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.41■□□□□ 0.38
EFNB3Q15768 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFNB3Q15768 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EFNB3Q15768 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFNB3Q15768 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
EFNB3Q15768 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.41■□□□□ 0.38
EFNB3Q15768 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFNB3Q15768 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.41■□□□□ 0.38
EFNB3Q15768 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EFNB3Q15768 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.41■□□□□ 0.38
EFNB3Q15768 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFNB3Q15768 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
EFNB3Q15768 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EFNB3Q15768 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EFNB3Q15768 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
EFNB3Q15768 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFNB3Q15768 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EFNB3Q15768 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFNB3Q15768 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFNB3Q15768 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.41■□□□□ 0.38
EFNB3Q15768 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.4■□□□□ 0.38
EFNB3Q15768 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EFNB3Q15768 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
EFNB3Q15768 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFNB3Q15768 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFNB3Q15768 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EFNB3Q15768 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EFNB3Q15768 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFNB3Q15768 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFNB3Q15768 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
EFNB3Q15768 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EFNB3Q15768 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.4■□□□□ 0.38
EFNB3Q15768 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.4■□□□□ 0.38
EFNB3Q15768 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EFNB3Q15768 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
EFNB3Q15768 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.4■□□□□ 0.38
EFNB3Q15768 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EFNB3Q15768 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EFNB3Q15768 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EFNB3Q15768 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
EFNB3Q15768 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFNB3Q15768 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFNB3Q15768 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
EFNB3Q15768 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
EFNB3Q15768 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EFNB3Q15768 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
EFNB3Q15768 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.39■□□□□ 0.37
EFNB3Q15768 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFNB3Q15768 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFNB3Q15768 AC027702.1-201ENST00000563810 1770 ntBASIC17.39■□□□□ 0.37
EFNB3Q15768 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EFNB3Q15768 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFNB3Q15768 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.39■□□□□ 0.37
EFNB3Q15768 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EFNB3Q15768 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.39■□□□□ 0.37
EFNB3Q15768 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFNB3Q15768 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFNB3Q15768 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFNB3Q15768 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EFNB3Q15768 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFNB3Q15768 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFNB3Q15768 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFNB3Q15768 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.38■□□□□ 0.37
EFNB3Q15768 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFNB3Q15768 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms