Protein–RNA interactions for Protein: Q05787

HRD3, ERAD-associated E3 ubiquitin-protein ligase component HRD3, yeastyeast

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD3Q05787 SSY1YDR160W 2559 nt2.78□□□□□ -1.96
HRD3Q05787 BOI1YBL085W 2943 nt2.78□□□□□ -1.96
HRD3Q05787 SPC72YAL047C 1869 nt2.77□□□□□ -1.97
HRD3Q05787 RIX1YHR197W 2292 nt2.77□□□□□ -1.97
HRD3Q05787 AI2Q0055 2565 nt2.77□□□□□ -1.97
HRD3Q05787 COG3YER157W 2406 nt2.77□□□□□ -1.97
HRD3Q05787 SSN8YNL025C 972 nt2.77□□□□□ -1.97
HRD3Q05787 YJR003CYJR003C 1560 nt2.77□□□□□ -1.97
HRD3Q05787 ROM1YGR070W 3468 nt2.77□□□□□ -1.97
HRD3Q05787 BPT1YLL015W 4680 nt2.77□□□□□ -1.97
HRD3Q05787 ECM5YMR176W 4236 nt2.76□□□□□ -1.97
HRD3Q05787 SMC2YFR031C 3513 nt2.76□□□□□ -1.97
HRD3Q05787 BUB1YGR188C 3066 nt2.76□□□□□ -1.97
HRD3Q05787 RRM3YHR031C 2172 nt2.76□□□□□ -1.97
HRD3Q05787 GPI8YDR331W 1236 nt2.76□□□□□ -1.97
HRD3Q05787 YDR413CYDR413C 576 nt2.76□□□□□ -1.97
HRD3Q05787 RMT2YDR465C 1239 nt2.76□□□□□ -1.97
HRD3Q05787 YHL006W-AYHL006W-A 354 nt2.76□□□□□ -1.97
HRD3Q05787 TIM8YJR135W-A 264 nt2.76□□□□□ -1.97
HRD3Q05787 YNL043CYNL043C 321 nt2.76□□□□□ -1.97
HRD3Q05787 YNL034WYNL034W 1839 nt2.76□□□□□ -1.97
HRD3Q05787 FUS1YCL027W 1539 nt2.76□□□□□ -1.97
HRD3Q05787 NDD1YOR372C 1665 nt2.76□□□□□ -1.97
HRD3Q05787 DUF1YOL087C 3351 nt2.75□□□□□ -1.97
HRD3Q05787 snR70snR70 164 nt2.75□□□□□ -1.97
HRD3Q05787 RPS17BYDR447C 411 nt2.75□□□□□ -1.97
HRD3Q05787 ESF2YNR054C 951 nt2.75□□□□□ -1.97
HRD3Q05787 TFC4YGR047C 3078 nt2.75□□□□□ -1.97
HRD3Q05787 TOM70YNL121C 1854 nt2.75□□□□□ -1.97
HRD3Q05787 SWT1YOR166C 1377 nt2.74□□□□□ -1.97
HRD3Q05787 YGR067CYGR067C 2415 nt2.74□□□□□ -1.97
HRD3Q05787 SDC1YDR469W 528 nt2.74□□□□□ -1.97
HRD3Q05787 FYV4YHR059W 393 nt2.74□□□□□ -1.97
HRD3Q05787 tT(UGU)Q1tT(UGU)Q1 76 nt2.74□□□□□ -1.97
HRD3Q05787 EGD1YPL037C 474 nt2.74□□□□□ -1.97
HRD3Q05787 NAB6YML117W 3405 nt2.73□□□□□ -1.97
HRD3Q05787 HPA3YEL066W 540 nt2.73□□□□□ -1.97
HRD3Q05787 SPB1YCL054W 2526 nt2.73□□□□□ -1.97
HRD3Q05787 DYN2YDR424C 279 nt2.72□□□□□ -1.97
HRD3Q05787 YER097WYER097W 330 nt2.72□□□□□ -1.97
HRD3Q05787 YMR31YFR049W 372 nt2.72□□□□□ -1.97
HRD3Q05787 URM1YIL008W 300 nt2.72□□□□□ -1.97
HRD3Q05787 YIL058WYIL058W 285 nt2.72□□□□□ -1.97
HRD3Q05787 AIM32YML050W 936 nt2.72□□□□□ -1.97
HRD3Q05787 COX7YMR256C 183 nt2.72□□□□□ -1.97
HRD3Q05787 BIL1YOR304C-A 231 nt2.72□□□□□ -1.97
HRD3Q05787 IKI3YLR384C 4050 nt2.72□□□□□ -1.97
HRD3Q05787 SOK1YDR006C 2706 nt2.71□□□□□ -1.98
HRD3Q05787 FRE2YKL220C 2136 nt2.71□□□□□ -1.98
HRD3Q05787 AXL1YPR122W 3627 nt2.71□□□□□ -1.98
HRD3Q05787 YDR366CYDR366C 399 nt2.71□□□□□ -1.98
HRD3Q05787 BAT1YHR208W 1182 nt2.71□□□□□ -1.98
HRD3Q05787 YKL083WYKL083W 615 nt2.71□□□□□ -1.98
HRD3Q05787 YMR158W-BYMR158W-B 321 nt2.71□□□□□ -1.98
HRD3Q05787 YOR282WYOR282W 321 nt2.71□□□□□ -1.98
HRD3Q05787 YPL238CYPL238C 390 nt2.71□□□□□ -1.98
HRD3Q05787 RSN1YMR266W 2862 nt2.71□□□□□ -1.98
HRD3Q05787 RLF2YPR018W 1821 nt2.7□□□□□ -1.98
HRD3Q05787 PSK2YOL045W 3306 nt2.7□□□□□ -1.98
HRD3Q05787 YHR032W-AYHR032W-A 180 nt2.7□□□□□ -1.98
HRD3Q05787 RPS22AYJL190C 393 nt2.7□□□□□ -1.98
HRD3Q05787 YAR053WYAR053W 297 nt2.7□□□□□ -1.98
HRD3Q05787 snR43snR43 209 nt2.7□□□□□ -1.98
HRD3Q05787 COX1Q0045 1605 nt2.7□□□□□ -1.98
HRD3Q05787 YJL016WYJL016W 1686 nt2.69□□□□□ -1.98
HRD3Q05787 CAJ1YER048C 1176 nt2.69□□□□□ -1.98
HRD3Q05787 TIM18YOR297C 579 nt2.69□□□□□ -1.98
HRD3Q05787 SGS1YMR190C 4344 nt2.69□□□□□ -1.98
HRD3Q05787 BCK1YJL095W 4437 nt2.69□□□□□ -1.98
HRD3Q05787 APC2YLR127C 2562 nt2.68□□□□□ -1.98
HRD3Q05787 NAB3YPL190C 2409 nt2.68□□□□□ -1.98
HRD3Q05787 YIL174WYIL174W 228 nt2.68□□□□□ -1.98
HRD3Q05787 MSL1YIR009W 336 nt2.68□□□□□ -1.98
HRD3Q05787 YJL222W-AYJL222W-A 228 nt2.68□□□□□ -1.98
HRD3Q05787 RPS22BYLR367W 393 nt2.68□□□□□ -1.98
HRD3Q05787 ATP3YBR039W 936 nt2.68□□□□□ -1.98
HRD3Q05787 ATP15YPL271W 189 nt2.68□□□□□ -1.98
HRD3Q05787 BNA4YBL098W 1383 nt2.68□□□□□ -1.98
HRD3Q05787 TPS2YDR074W 2691 nt2.68□□□□□ -1.98
HRD3Q05787 NEW1YPL226W 3591 nt2.68□□□□□ -1.98
HRD3Q05787 PDR3YBL005W 2931 nt2.68□□□□□ -1.98
HRD3Q05787 TRM2YKR056W 1920 nt2.68□□□□□ -1.98
HRD3Q05787 YIL166CYIL166C 1629 nt2.68□□□□□ -1.98
HRD3Q05787 SLN1YIL147C 3663 nt2.67□□□□□ -1.98
HRD3Q05787 YLR278CYLR278C 4026 nt2.67□□□□□ -1.98
HRD3Q05787 POM152YMR129W 4014 nt2.67□□□□□ -1.98
HRD3Q05787 snR65snR65 100 nt2.67□□□□□ -1.98
HRD3Q05787 RPL36BYPL249C-A 303 nt2.67□□□□□ -1.98
HRD3Q05787 ROX1YPR065W 1107 nt2.67□□□□□ -1.98
HRD3Q05787 YPK1YKL126W 2043 nt2.67□□□□□ -1.98
HRD3Q05787 FKS3YMR306W 5358 nt2.67□□□□□ -1.98
HRD3Q05787 PSK1YAL017W 4071 nt2.67□□□□□ -1.98
HRD3Q05787 TOM1YDR457W 9807 nt2.66□□□□□ -1.98
HRD3Q05787 PTP3YER075C 2787 nt2.66□□□□□ -1.98
HRD3Q05787 YDR102CYDR102C 333 nt2.66□□□□□ -1.98
HRD3Q05787 TIM11YDR322C-A 291 nt2.66□□□□□ -1.98
HRD3Q05787 YFL032WYFL032W 321 nt2.66□□□□□ -1.98
HRD3Q05787 tW(UCA)QtW(UCA)Q 74 nt2.66□□□□□ -1.98
HRD3Q05787 HYR1YIR037W 492 nt2.66□□□□□ -1.98
HRD3Q05787 YJL202CYJL202C 348 nt2.66□□□□□ -1.98
Retrieved 100 of 7,029 protein–RNA pairs in 87 ms