Protein–RNA interactions for Protein: Q04121

NHX1, Endosomal/prevacuolar sodium/hydrogen exchanger, yeastyeast

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NHX1Q04121 NHP2YDL208W 471 nt3□□□□□ -1.93
NHX1Q04121 MSL1YIR009W 336 nt3□□□□□ -1.93
NHX1Q04121 RPS18BYML026C 441 nt3□□□□□ -1.93
NHX1Q04121 YMR031W-AYMR031W-A 327 nt3□□□□□ -1.93
NHX1Q04121 RGM1YMR182C 636 nt3□□□□□ -1.93
NHX1Q04121 RPL9BYNL067W 576 nt3□□□□□ -1.93
NHX1Q04121 RPL25YOL127W 429 nt3□□□□□ -1.93
NHX1Q04121 YOR231C-AYOR231C-A 201 nt3□□□□□ -1.93
NHX1Q04121 BIL1YOR304C-A 231 nt3□□□□□ -1.93
NHX1Q04121 ATP3YBR039W 936 nt3□□□□□ -1.93
NHX1Q04121 NET1YJL076W 3570 nt3□□□□□ -1.93
NHX1Q04121 RPN1YHR027C 2982 nt3□□□□□ -1.93
NHX1Q04121 KAP104YBR017C 2757 nt2.99□□□□□ -1.93
NHX1Q04121 CDC24YAL041W 2565 nt2.99□□□□□ -1.93
NHX1Q04121 snR76snR76 109 nt2.99□□□□□ -1.93
NHX1Q04121 TWF1YGR080W 999 nt2.99□□□□□ -1.93
NHX1Q04121 YHL005CYHL005C 393 nt2.99□□□□□ -1.93
NHX1Q04121 IRC10YOL015W 1761 nt2.99□□□□□ -1.93
NHX1Q04121 GCD6YDR211W 2139 nt2.98□□□□□ -1.93
NHX1Q04121 snR79snR79 84 nt2.98□□□□□ -1.93
NHX1Q04121 YDR413CYDR413C 576 nt2.98□□□□□ -1.93
NHX1Q04121 YER097WYER097W 330 nt2.98□□□□□ -1.93
NHX1Q04121 YFR056CYFR056C 369 nt2.98□□□□□ -1.93
NHX1Q04121 YLR031WYLR031W 561 nt2.98□□□□□ -1.93
NHX1Q04121 YBR197CYBR197C 654 nt2.98□□□□□ -1.93
NHX1Q04121 TSC11YER093C 4293 nt2.98□□□□□ -1.93
NHX1Q04121 RPA190YOR341W 4995 nt2.98□□□□□ -1.93
NHX1Q04121 RRM3YHR031C 2172 nt2.98□□□□□ -1.93
NHX1Q04121 TLC1TLC1 1301 nt2.97□□□□□ -1.93
NHX1Q04121 YDR102CYDR102C 333 nt2.97□□□□□ -1.93
NHX1Q04121 AYR1YIL124W 894 nt2.97□□□□□ -1.93
NHX1Q04121 UTP30YKR060W 825 nt2.97□□□□□ -1.93
NHX1Q04121 ROX1YPR065W 1107 nt2.97□□□□□ -1.93
NHX1Q04121 PUF6YDR496C 1971 nt2.96□□□□□ -1.94
NHX1Q04121 DNL4YOR005C 2835 nt2.96□□□□□ -1.94
NHX1Q04121 BMH2YDR099W 822 nt2.96□□□□□ -1.94
NHX1Q04121 RPL20AYMR242C 519 nt2.96□□□□□ -1.94
NHX1Q04121 TIM18YOR297C 579 nt2.96□□□□□ -1.94
NHX1Q04121 YER121WYER121W 345 nt2.95□□□□□ -1.94
NHX1Q04121 YJL202CYJL202C 348 nt2.95□□□□□ -1.94
NHX1Q04121 ROG1YGL144C 2058 nt2.95□□□□□ -1.94
NHX1Q04121 SWT1YOR166C 1377 nt2.95□□□□□ -1.94
NHX1Q04121 FLO1YAR050W 4614 nt2.95□□□□□ -1.94
NHX1Q04121 YME2YMR302C 2553 nt2.94□□□□□ -1.94
NHX1Q04121 YDL011CYDL011C 324 nt2.94□□□□□ -1.94
NHX1Q04121 YLR012CYLR012C 300 nt2.94□□□□□ -1.94
NHX1Q04121 RPL6AYML073C 531 nt2.94□□□□□ -1.94
NHX1Q04121 TAO3YIL129C 7131 nt2.94□□□□□ -1.94
NHX1Q04121 YIL169CYIL169C 2988 nt2.94□□□□□ -1.94
NHX1Q04121 NAN1YPL126W 2691 nt2.93□□□□□ -1.94
NHX1Q04121 BUD4YJR092W 4344 nt2.93□□□□□ -1.94
NHX1Q04121 SDC1YDR469W 528 nt2.93□□□□□ -1.94
NHX1Q04121 tW(UCA)QtW(UCA)Q 74 nt2.93□□□□□ -1.94
NHX1Q04121 FCF2YLR051C 654 nt2.93□□□□□ -1.94
NHX1Q04121 APC9YLR102C 798 nt2.93□□□□□ -1.94
NHX1Q04121 YMR324CYMR324C 243 nt2.93□□□□□ -1.94
NHX1Q04121 IRC23YOR044W 474 nt2.93□□□□□ -1.94
NHX1Q04121 VPS64YDR200C 1815 nt2.93□□□□□ -1.94
NHX1Q04121 PMR1YGL167C 2853 nt2.93□□□□□ -1.94
NHX1Q04121 IKI3YLR384C 4050 nt2.93□□□□□ -1.94
NHX1Q04121 ORC1YML065W 2745 nt2.92□□□□□ -1.94
NHX1Q04121 PCF11YDR228C 1881 nt2.92□□□□□ -1.94
NHX1Q04121 HMF1YER057C 390 nt2.92□□□□□ -1.94
NHX1Q04121 YBL073WYBL073W 312 nt2.92□□□□□ -1.94
NHX1Q04121 ILS1YBL076C 3219 nt2.91□□□□□ -1.94
NHX1Q04121 ECM21YBL101C 3354 nt2.91□□□□□ -1.94
NHX1Q04121 snR65snR65 100 nt2.91□□□□□ -1.94
NHX1Q04121 WIP1YDR374W-A 270 nt2.91□□□□□ -1.94
NHX1Q04121 MZM1YDR493W 372 nt2.91□□□□□ -1.94
NHX1Q04121 RPL26AYLR344W 384 nt2.91□□□□□ -1.94
NHX1Q04121 ISF1YMR081C 1017 nt2.91□□□□□ -1.94
NHX1Q04121 YNL010WYNL010W 726 nt2.91□□□□□ -1.94
NHX1Q04121 PGA1YNL158W 597 nt2.91□□□□□ -1.94
NHX1Q04121 YPL182CYPL182C 384 nt2.91□□□□□ -1.94
NHX1Q04121 YPR146CYPR146C 330 nt2.91□□□□□ -1.94
NHX1Q04121 SAK1YER129W 3429 nt2.91□□□□□ -1.94
NHX1Q04121 DUG2YBR281C 2637 nt2.9□□□□□ -1.94
NHX1Q04121 MSB2YGR014W 3921 nt2.9□□□□□ -1.95
NHX1Q04121 SMA2YML066C 1110 nt2.9□□□□□ -1.95
NHX1Q04121 FPR1YNL135C 345 nt2.9□□□□□ -1.95
NHX1Q04121 GIN4YDR507C 3429 nt2.9□□□□□ -1.95
NHX1Q04121 IPT1YDR072C 1584 nt2.9□□□□□ -1.95
NHX1Q04121 VPS41YDR080W 2979 nt2.9□□□□□ -1.95
NHX1Q04121 FRE2YKL220C 2136 nt2.89□□□□□ -1.95
NHX1Q04121 YCR022CYCR022C 345 nt2.89□□□□□ -1.95
NHX1Q04121 RPL23BYER117W 414 nt2.89□□□□□ -1.95
NHX1Q04121 YOR050CYOR050C 348 nt2.89□□□□□ -1.95
NHX1Q04121 KSP1YHR082C 3090 nt2.89□□□□□ -1.95
NHX1Q04121 UBP14YBR058C 2346 nt2.88□□□□□ -1.95
NHX1Q04121 YPR089WYPR089W 2667 nt2.88□□□□□ -1.95
NHX1Q04121 NAB3YPL190C 2409 nt2.88□□□□□ -1.95
NHX1Q04121 NUP120YKL057C 3114 nt2.88□□□□□ -1.95
NHX1Q04121 FIR1YER032W 2631 nt2.88□□□□□ -1.95
NHX1Q04121 YFL032WYFL032W 321 nt2.88□□□□□ -1.95
NHX1Q04121 YGL014C-AYGL014C-A 162 nt2.88□□□□□ -1.95
NHX1Q04121 YKL083WYKL083W 615 nt2.88□□□□□ -1.95
NHX1Q04121 SHE2YKL130C 741 nt2.88□□□□□ -1.95
NHX1Q04121 LSM7YNL147W 348 nt2.88□□□□□ -1.95
NHX1Q04121 RSN1YMR266W 2862 nt2.88□□□□□ -1.95
NHX1Q04121 DBP7YKR024C 2229 nt2.88□□□□□ -1.95
Retrieved 100 of 7,029 protein–RNA pairs in 29.9 ms