Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCL20P78556 MIR4449-201ENST00000578365 66 ntBASIC16.09■□□□□ 0.17
CCL20P78556 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.09■□□□□ 0.17
CCL20P78556 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL20P78556 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL20P78556 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CCL20P78556 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CCL20P78556 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL20P78556 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CCL20P78556 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.09■□□□□ 0.17
CCL20P78556 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL20P78556 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.08■□□□□ 0.17
CCL20P78556 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCL20P78556 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCL20P78556 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CCL20P78556 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.08■□□□□ 0.17
CCL20P78556 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCL20P78556 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.08■□□□□ 0.17
CCL20P78556 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCL20P78556 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCL20P78556 AC010141.3-201ENST00000456659 717 ntBASIC16.08■□□□□ 0.16
CCL20P78556 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCL20P78556 AC137630.3-201ENST00000607245 391 ntBASIC16.08■□□□□ 0.16
CCL20P78556 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CCL20P78556 AL049812.1-201ENST00000432563 2267 ntBASIC16.08■□□□□ 0.16
CCL20P78556 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.08■□□□□ 0.16
CCL20P78556 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCL20P78556 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.08■□□□□ 0.16
CCL20P78556 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.08■□□□□ 0.16
CCL20P78556 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCL20P78556 AC120498.9-201ENST00000339021 3867 ntBASIC16.08■□□□□ 0.16
CCL20P78556 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.08■□□□□ 0.16
CCL20P78556 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.07■□□□□ 0.16
CCL20P78556 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCL20P78556 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CCL20P78556 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL20P78556 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC16.07■□□□□ 0.16
CCL20P78556 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CCL20P78556 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC16.07■□□□□ 0.16
CCL20P78556 AP006587.3-201ENST00000525742 1516 ntBASIC16.07■□□□□ 0.16
CCL20P78556 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL20P78556 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL20P78556 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL20P78556 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CCL20P78556 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.07■□□□□ 0.16
CCL20P78556 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL20P78556 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL20P78556 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
CCL20P78556 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.07■□□□□ 0.16
CCL20P78556 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL20P78556 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL20P78556 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.07■□□□□ 0.16
CCL20P78556 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCL20P78556 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL20P78556 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CCL20P78556 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL20P78556 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCL20P78556 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCL20P78556 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCL20P78556 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCL20P78556 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CCL20P78556 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL20P78556 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CCL20P78556 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.06■□□□□ 0.16
CCL20P78556 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC16.06■□□□□ 0.16
CCL20P78556 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC16.06■□□□□ 0.16
CCL20P78556 AC087239.1-201ENST00000622671 572 ntBASIC16.06■□□□□ 0.16
CCL20P78556 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.06■□□□□ 0.16
CCL20P78556 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL20P78556 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL20P78556 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCL20P78556 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CCL20P78556 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL20P78556 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.05■□□□□ 0.16
CCL20P78556 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.05■□□□□ 0.16
CCL20P78556 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL20P78556 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CCL20P78556 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCL20P78556 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CCL20P78556 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL20P78556 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC16.05■□□□□ 0.16
CCL20P78556 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCL20P78556 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL20P78556 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC16.05■□□□□ 0.16
CCL20P78556 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.05■□□□□ 0.16
CCL20P78556 AC010980.1-201ENST00000587192 1142 ntBASIC16.05■□□□□ 0.16
CCL20P78556 AC074183.2-201ENST00000623112 922 ntBASIC16.05■□□□□ 0.16
CCL20P78556 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL20P78556 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL20P78556 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL20P78556 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL20P78556 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCL20P78556 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL20P78556 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCL20P78556 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCL20P78556 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CCL20P78556 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CCL20P78556 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL20P78556 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCL20P78556 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms