Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 FAM207BP-201ENST00000447172 505 ntBASIC14.96□□□□□ -0.01
PRKDCP78527 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.96□□□□□ -0.01
PRKDCP78527 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PRKDCP78527 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
PRKDCP78527 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PRKDCP78527 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC14.96□□□□□ -0.01
PRKDCP78527 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PRKDCP78527 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PRKDCP78527 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PRKDCP78527 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.96□□□□□ -0.02
PRKDCP78527 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
PRKDCP78527 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC14.96□□□□□ -0.02
PRKDCP78527 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
PRKDCP78527 AC139887.4-201ENST00000607877 719 ntBASIC14.96□□□□□ -0.02
PRKDCP78527 AC092053.2-201ENST00000640557 1818 ntBASIC14.96□□□□□ -0.02
PRKDCP78527 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PRKDCP78527 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC14.95□□□□□ -0.02
PRKDCP78527 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PRKDCP78527 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PRKDCP78527 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PRKDCP78527 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.95□□□□□ -0.02
PRKDCP78527 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PRKDCP78527 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PRKDCP78527 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PRKDCP78527 NFE2L3P1-201ENST00000588207 1959 ntBASIC14.95□□□□□ -0.02
PRKDCP78527 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC14.95□□□□□ -0.02
PRKDCP78527 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PRKDCP78527 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC14.95□□□□□ -0.02
PRKDCP78527 C11orf96-202ENST00000528572 1834 ntBASIC14.95□□□□□ -0.02
PRKDCP78527 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PRKDCP78527 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PRKDCP78527 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PRKDCP78527 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.95□□□□□ -0.02
PRKDCP78527 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PRKDCP78527 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PRKDCP78527 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PRKDCP78527 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PRKDCP78527 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PRKDCP78527 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.94□□□□□ -0.02
PRKDCP78527 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.94□□□□□ -0.02
PRKDCP78527 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC14.94□□□□□ -0.02
PRKDCP78527 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
PRKDCP78527 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.94□□□□□ -0.02
PRKDCP78527 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.94□□□□□ -0.02
PRKDCP78527 FDX1P1-201ENST00000449115 551 ntBASIC14.94□□□□□ -0.02
PRKDCP78527 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.94□□□□□ -0.02
PRKDCP78527 AL691432.3-201ENST00000621860 400 ntBASIC14.94□□□□□ -0.02
PRKDCP78527 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC14.94□□□□□ -0.02
PRKDCP78527 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PRKDCP78527 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PRKDCP78527 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PRKDCP78527 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC14.94□□□□□ -0.02
PRKDCP78527 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.94□□□□□ -0.02
PRKDCP78527 CYP21A1P-202ENST00000354927 1481 ntBASIC14.94□□□□□ -0.02
PRKDCP78527 AC005332.1-201ENST00000577698 1310 ntBASIC14.94□□□□□ -0.02
PRKDCP78527 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PRKDCP78527 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PRKDCP78527 FAM86EP-206ENST00000510506 987 ntBASIC14.94□□□□□ -0.02
PRKDCP78527 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.94□□□□□ -0.02
PRKDCP78527 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRKDCP78527 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRKDCP78527 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRKDCP78527 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PRKDCP78527 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC14.93□□□□□ -0.02
PRKDCP78527 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRKDCP78527 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRKDCP78527 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRKDCP78527 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRKDCP78527 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRKDCP78527 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14.93□□□□□ -0.02
PRKDCP78527 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRKDCP78527 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC14.93□□□□□ -0.02
PRKDCP78527 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.93□□□□□ -0.02
PRKDCP78527 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRKDCP78527 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRKDCP78527 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRKDCP78527 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRKDCP78527 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.93□□□□□ -0.02
PRKDCP78527 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.93□□□□□ -0.02
PRKDCP78527 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRKDCP78527 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC14.93□□□□□ -0.02
PRKDCP78527 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRKDCP78527 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.92□□□□□ -0.02
PRKDCP78527 AC245052.3-201ENST00000450182 901 ntBASIC14.92□□□□□ -0.02
PRKDCP78527 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRKDCP78527 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRKDCP78527 AC130371.2-201ENST00000619443 611 ntBASIC14.92□□□□□ -0.02
PRKDCP78527 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.92□□□□□ -0.02
PRKDCP78527 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC14.92□□□□□ -0.02
PRKDCP78527 TSPY14P-201ENST00000303979 915 ntBASIC14.92□□□□□ -0.02
PRKDCP78527 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRKDCP78527 AC091390.4-202ENST00000476426 537 ntBASIC14.92□□□□□ -0.02
PRKDCP78527 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRKDCP78527 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.92□□□□□ -0.02
PRKDCP78527 ANOS2P-203ENST00000472227 1816 ntBASIC14.92□□□□□ -0.02
PRKDCP78527 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC14.92□□□□□ -0.02
PRKDCP78527 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC14.92□□□□□ -0.02
PRKDCP78527 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.92□□□□□ -0.02
PRKDCP78527 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC14.92□□□□□ -0.02
PRKDCP78527 TSPY21P-201ENST00000433481 731 ntBASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms