Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH6P55285 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH6P55285 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH6P55285 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.23■□□□□ 0.99
CDH6P55285 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.23■□□□□ 0.99
CDH6P55285 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH6P55285 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH6P55285 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH6P55285 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH6P55285 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH6P55285 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH6P55285 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH6P55285 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.22■□□□□ 0.99
CDH6P55285 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDH6P55285 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDH6P55285 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.22■□□□□ 0.99
CDH6P55285 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.22■□□□□ 0.99
CDH6P55285 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CDH6P55285 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.22■□□□□ 0.99
CDH6P55285 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.22■□□□□ 0.99
CDH6P55285 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.22■□□□□ 0.99
CDH6P55285 AC022517.1-201ENST00000592429 346 ntBASIC21.22■□□□□ 0.99
CDH6P55285 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
CDH6P55285 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH6P55285 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDH6P55285 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.21■□□□□ 0.99
CDH6P55285 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.21■□□□□ 0.99
CDH6P55285 AC092720.2-201ENST00000602388 1665 ntBASIC21.21■□□□□ 0.99
CDH6P55285 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.21■□□□□ 0.99
CDH6P55285 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
CDH6P55285 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH6P55285 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH6P55285 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH6P55285 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH6P55285 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDH6P55285 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH6P55285 AL591742.1-201ENST00000604433 565 ntBASIC21.21■□□□□ 0.99
CDH6P55285 AC013268.1-206ENST00000638368 961 ntBASIC21.21■□□□□ 0.99
CDH6P55285 AC112229.1-201ENST00000639295 961 ntBASIC21.21■□□□□ 0.99
CDH6P55285 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH6P55285 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH6P55285 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH6P55285 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH6P55285 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CDH6P55285 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CDH6P55285 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH6P55285 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH6P55285 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.2■□□□□ 0.99
CDH6P55285 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.2■□□□□ 0.99
CDH6P55285 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.2■□□□□ 0.98
CDH6P55285 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH6P55285 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH6P55285 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CDH6P55285 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDH6P55285 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH6P55285 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDH6P55285 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH6P55285 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.2■□□□□ 0.98
CDH6P55285 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDH6P55285 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CDH6P55285 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.2■□□□□ 0.98
CDH6P55285 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.2■□□□□ 0.98
CDH6P55285 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH6P55285 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.2■□□□□ 0.98
CDH6P55285 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH6P55285 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.2■□□□□ 0.98
CDH6P55285 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.2■□□□□ 0.98
CDH6P55285 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDH6P55285 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CDH6P55285 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CDH6P55285 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDH6P55285 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
CDH6P55285 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH6P55285 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.19■□□□□ 0.98
CDH6P55285 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.19■□□□□ 0.98
CDH6P55285 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.19■□□□□ 0.98
CDH6P55285 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH6P55285 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.19■□□□□ 0.98
CDH6P55285 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.19■□□□□ 0.98
CDH6P55285 AC011767.1-201ENST00000617410 1153 ntBASIC21.19■□□□□ 0.98
CDH6P55285 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.19■□□□□ 0.98
CDH6P55285 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH6P55285 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDH6P55285 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.19■□□□□ 0.98
CDH6P55285 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH6P55285 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH6P55285 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDH6P55285 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.19■□□□□ 0.98
CDH6P55285 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CDH6P55285 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH6P55285 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH6P55285 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.18■□□□□ 0.98
CDH6P55285 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.18■□□□□ 0.98
CDH6P55285 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH6P55285 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.18■□□□□ 0.98
CDH6P55285 AL512408.1-201ENST00000569378 2000 ntBASIC21.18■□□□□ 0.98
CDH6P55285 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH6P55285 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH6P55285 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.18■□□□□ 0.98
CDH6P55285 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms