Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.33■□□□□ 0.52
CASP6P55212 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASP6P55212 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASP6P55212 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.33■□□□□ 0.52
CASP6P55212 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.33■□□□□ 0.52
CASP6P55212 Z99916.2-201ENST00000604037 246 ntBASIC18.33■□□□□ 0.52
CASP6P55212 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
CASP6P55212 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CASP6P55212 FAM99A-202ENST00000538190 1989 ntBASIC18.33■□□□□ 0.52
CASP6P55212 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CASP6P55212 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
CASP6P55212 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CASP6P55212 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASP6P55212 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASP6P55212 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASP6P55212 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASP6P55212 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CASP6P55212 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.33■□□□□ 0.52
CASP6P55212 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.32■□□□□ 0.52
CASP6P55212 AL135905.2-201ENST00000584934 1404 ntBASIC18.32■□□□□ 0.52
CASP6P55212 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.32■□□□□ 0.52
CASP6P55212 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASP6P55212 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASP6P55212 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.32■□□□□ 0.52
CASP6P55212 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CASP6P55212 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CASP6P55212 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CASP6P55212 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CASP6P55212 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASP6P55212 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CASP6P55212 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.32■□□□□ 0.52
CASP6P55212 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CASP6P55212 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASP6P55212 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CASP6P55212 AC233263.1-201ENST00000578059 224 ntBASIC18.32■□□□□ 0.52
CASP6P55212 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.32■□□□□ 0.52
CASP6P55212 REXO1L12P-201ENST00000622156 912 ntBASIC18.32■□□□□ 0.52
CASP6P55212 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CASP6P55212 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CASP6P55212 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CASP6P55212 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASP6P55212 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASP6P55212 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CASP6P55212 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CASP6P55212 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASP6P55212 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASP6P55212 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASP6P55212 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.31■□□□□ 0.52
CASP6P55212 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.31■□□□□ 0.52
CASP6P55212 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
CASP6P55212 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CASP6P55212 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASP6P55212 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CASP6P55212 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.31■□□□□ 0.52
CASP6P55212 AC239809.2-201ENST00000415381 517 ntBASIC18.31■□□□□ 0.52
CASP6P55212 AC012618.2-201ENST00000428058 849 ntBASIC18.31■□□□□ 0.52
CASP6P55212 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.31■□□□□ 0.52
CASP6P55212 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CASP6P55212 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.31■□□□□ 0.52
CASP6P55212 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.31■□□□□ 0.52
CASP6P55212 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CASP6P55212 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.31■□□□□ 0.52
CASP6P55212 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.31■□□□□ 0.52
CASP6P55212 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.31■□□□□ 0.52
CASP6P55212 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CASP6P55212 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CASP6P55212 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.31■□□□□ 0.52
CASP6P55212 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CASP6P55212 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASP6P55212 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASP6P55212 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.31■□□□□ 0.52
CASP6P55212 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CASP6P55212 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASP6P55212 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CASP6P55212 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CASP6P55212 AC026471.6-201ENST00000622954 1905 ntBASIC18.31■□□□□ 0.52
CASP6P55212 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CASP6P55212 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.31■□□□□ 0.52
CASP6P55212 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
CASP6P55212 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.3■□□□□ 0.52
CASP6P55212 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.3■□□□□ 0.52
CASP6P55212 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.3■□□□□ 0.52
CASP6P55212 LINC01023-201ENST00000606054 436 ntBASIC18.3■□□□□ 0.52
CASP6P55212 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CASP6P55212 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CASP6P55212 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
CASP6P55212 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CASP6P55212 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.3■□□□□ 0.52
CASP6P55212 AC087633.2-202ENST00000565166 1439 ntBASIC18.3■□□□□ 0.52
CASP6P55212 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CASP6P55212 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CASP6P55212 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.3■□□□□ 0.52
CASP6P55212 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CASP6P55212 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CASP6P55212 AC080038.3-201ENST00000623346 1952 ntBASIC18.3■□□□□ 0.52
CASP6P55212 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CASP6P55212 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CASP6P55212 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CASP6P55212 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.29■□□□□ 0.52
CASP6P55212 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms