Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ATP1B3P54709 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATP1B3P54709 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ATP1B3P54709 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATP1B3P54709 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP1B3P54709 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ATP1B3P54709 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP1B3P54709 FP700111.2-201ENST00000619190 1892 ntBASIC17.65■□□□□ 0.42
ATP1B3P54709 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATP1B3P54709 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ATP1B3P54709 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATP1B3P54709 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP1B3P54709 MIR638-201ENST00000385237 100 ntBASIC17.65■□□□□ 0.42
ATP1B3P54709 AC123595.1-201ENST00000440769 1046 ntBASIC17.65■□□□□ 0.42
ATP1B3P54709 AC010141.2-201ENST00000452426 721 ntBASIC17.65■□□□□ 0.42
ATP1B3P54709 DUX4L2-201ENST00000561772 1275 ntBASIC17.65■□□□□ 0.42
ATP1B3P54709 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
ATP1B3P54709 DUX4L6-201ENST00000626483 1275 ntBASIC17.65■□□□□ 0.42
ATP1B3P54709 DUX4L1-201ENST00000627662 1275 ntBASIC17.65■□□□□ 0.42
ATP1B3P54709 DUX4L8-201ENST00000629013 1275 ntBASIC17.65■□□□□ 0.42
ATP1B3P54709 DUX4L3-201ENST00000630187 1275 ntBASIC17.65■□□□□ 0.42
ATP1B3P54709 DUX4L7-201ENST00000630678 1275 ntBASIC17.65■□□□□ 0.42
ATP1B3P54709 DUX4L5-201ENST00000630834 1275 ntBASIC17.65■□□□□ 0.42
ATP1B3P54709 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ATP1B3P54709 AC073314.1-201ENST00000568729 2216 ntBASIC17.65■□□□□ 0.42
ATP1B3P54709 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP1B3P54709 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP1B3P54709 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP1B3P54709 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
ATP1B3P54709 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATP1B3P54709 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATP1B3P54709 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATP1B3P54709 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATP1B3P54709 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.65■□□□□ 0.42
ATP1B3P54709 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP1B3P54709 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP1B3P54709 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ATP1B3P54709 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.64■□□□□ 0.42
ATP1B3P54709 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP1B3P54709 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.64■□□□□ 0.41
ATP1B3P54709 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.64■□□□□ 0.41
ATP1B3P54709 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ATP1B3P54709 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.64■□□□□ 0.41
ATP1B3P54709 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP1B3P54709 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP1B3P54709 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP1B3P54709 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ATP1B3P54709 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.64■□□□□ 0.41
ATP1B3P54709 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.64■□□□□ 0.41
ATP1B3P54709 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.64■□□□□ 0.41
ATP1B3P54709 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.64■□□□□ 0.41
ATP1B3P54709 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP1B3P54709 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ATP1B3P54709 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.64■□□□□ 0.41
ATP1B3P54709 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP1B3P54709 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.64■□□□□ 0.41
ATP1B3P54709 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.64■□□□□ 0.41
ATP1B3P54709 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ATP1B3P54709 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP1B3P54709 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP1B3P54709 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP1B3P54709 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP1B3P54709 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
ATP1B3P54709 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.63■□□□□ 0.41
ATP1B3P54709 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ATP1B3P54709 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.63■□□□□ 0.41
ATP1B3P54709 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.63■□□□□ 0.41
ATP1B3P54709 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.63■□□□□ 0.41
ATP1B3P54709 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP1B3P54709 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATP1B3P54709 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.63■□□□□ 0.41
ATP1B3P54709 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.63■□□□□ 0.41
ATP1B3P54709 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP1B3P54709 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.63■□□□□ 0.41
ATP1B3P54709 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP1B3P54709 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP1B3P54709 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP1B3P54709 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP1B3P54709 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP1B3P54709 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP1B3P54709 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATP1B3P54709 AC027702.1-201ENST00000563810 1770 ntBASIC17.62■□□□□ 0.41
ATP1B3P54709 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.62■□□□□ 0.41
ATP1B3P54709 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.62■□□□□ 0.41
ATP1B3P54709 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATP1B3P54709 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATP1B3P54709 AC104187.1-201ENST00000607510 612 ntBASIC17.62■□□□□ 0.41
ATP1B3P54709 RARRES2P11-201ENST00000635158 484 ntBASIC17.62■□□□□ 0.41
ATP1B3P54709 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP1B3P54709 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
ATP1B3P54709 AC020907.5-201ENST00000624372 1936 ntBASIC17.62■□□□□ 0.41
ATP1B3P54709 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ATP1B3P54709 AC087289.5-201ENST00000586076 3175 ntBASIC17.62■□□□□ 0.41
ATP1B3P54709 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
ATP1B3P54709 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP1B3P54709 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATP1B3P54709 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.61■□□□□ 0.41
ATP1B3P54709 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATP1B3P54709 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.61■□□□□ 0.41
ATP1B3P54709 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms