Protein–RNA interactions for Protein: P53973

HDA1, Histone deacetylase HDA1, yeastyeast

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA1P53973 SPP382YLR424W 2127 nt3.21□□□□□ -1.9
HDA1P53973 ORC1YML065W 2745 nt3.21□□□□□ -1.9
HDA1P53973 PCF11YDR228C 1881 nt3.21□□□□□ -1.9
HDA1P53973 MAK21YDR060W 3078 nt3.21□□□□□ -1.9
HDA1P53973 FUS1YCL027W 1539 nt3.2□□□□□ -1.9
HDA1P53973 YDR183C-AYDR183C-A 258 nt3.2□□□□□ -1.9
HDA1P53973 SPG3YDR504C 384 nt3.2□□□□□ -1.9
HDA1P53973 GCN4YEL009C 846 nt3.2□□□□□ -1.9
HDA1P53973 FCF2YLR051C 654 nt3.2□□□□□ -1.9
HDA1P53973 YPL229WYPL229W 621 nt3.2□□□□□ -1.9
HDA1P53973 YBP1YBR216C 2025 nt3.2□□□□□ -1.9
HDA1P53973 DBP10YDL031W 2988 nt3.19□□□□□ -1.9
HDA1P53973 YPK1YKL126W 2043 nt3.19□□□□□ -1.9
HDA1P53973 ATG13YPR185W 2217 nt3.19□□□□□ -1.9
HDA1P53973 UBP14YBR058C 2346 nt3.19□□□□□ -1.9
HDA1P53973 YLR154C-HYLR154C-H 132 nt3.19□□□□□ -1.9
HDA1P53973 YLR156C-AYLR156C-A 132 nt3.19□□□□□ -1.9
HDA1P53973 YLR157C-CYLR157C-C 132 nt3.19□□□□□ -1.9
HDA1P53973 YLR159C-AYLR159C-A 132 nt3.19□□□□□ -1.9
HDA1P53973 MDV1YJL112W 2145 nt3.19□□□□□ -1.9
HDA1P53973 MSS11YMR164C 2277 nt3.18□□□□□ -1.9
HDA1P53973 YHR078WYHR078W 1659 nt3.18□□□□□ -1.9
HDA1P53973 YBL073WYBL073W 312 nt3.18□□□□□ -1.9
HDA1P53973 ROM1YGR070W 3468 nt3.18□□□□□ -1.9
HDA1P53973 NOT5YPR072W 1683 nt3.17□□□□□ -1.9
HDA1P53973 FAR1YJL157C 2493 nt3.17□□□□□ -1.9
HDA1P53973 ISF1YMR081C 1017 nt3.17□□□□□ -1.9
HDA1P53973 NAN1YPL126W 2691 nt3.16□□□□□ -1.9
HDA1P53973 YPL216WYPL216W 3309 nt3.16□□□□□ -1.9
HDA1P53973 VPS41YDR080W 2979 nt3.16□□□□□ -1.9
HDA1P53973 NUP82YJL061W 2142 nt3.16□□□□□ -1.9
HDA1P53973 ADK1YDR226W 669 nt3.16□□□□□ -1.9
HDA1P53973 YER023C-AYER023C-A 213 nt3.16□□□□□ -1.9
HDA1P53973 YMR31YFR049W 372 nt3.16□□□□□ -1.9
HDA1P53973 USE1YGL098W 738 nt3.16□□□□□ -1.9
HDA1P53973 NCE101YJL205C 162 nt3.16□□□□□ -1.9
HDA1P53973 GPI14YJR013W 1212 nt3.16□□□□□ -1.9
HDA1P53973 BOI1YBL085W 2943 nt3.16□□□□□ -1.9
HDA1P53973 TOM70YNL121C 1854 nt3.16□□□□□ -1.9
HDA1P53973 VPS52YDR484W 1926 nt3.15□□□□□ -1.9
HDA1P53973 DOA4YDR069C 2781 nt3.15□□□□□ -1.9
HDA1P53973 BRO1YPL084W 2535 nt3.15□□□□□ -1.91
HDA1P53973 YDR169C-AYDR169C-A 150 nt3.15□□□□□ -1.91
HDA1P53973 RPL33AYPL143W 324 nt3.15□□□□□ -1.91
HDA1P53973 ATP15YPL271W 189 nt3.15□□□□□ -1.91
HDA1P53973 DIA2YOR080W 2199 nt3.14□□□□□ -1.91
HDA1P53973 SPB1YCL054W 2526 nt3.14□□□□□ -1.91
HDA1P53973 HYR1YIR037W 492 nt3.14□□□□□ -1.91
HDA1P53973 TMA22YJR014W 597 nt3.14□□□□□ -1.91
HDA1P53973 LCL2YLR104W 396 nt3.14□□□□□ -1.91
HDA1P53973 RPL26AYLR344W 384 nt3.14□□□□□ -1.91
HDA1P53973 REV1YOR346W 2958 nt3.14□□□□□ -1.91
HDA1P53973 ITC1YGL133W 3795 nt3.13□□□□□ -1.91
HDA1P53973 BNA4YBL098W 1383 nt3.13□□□□□ -1.91
HDA1P53973 POM152YMR129W 4014 nt3.13□□□□□ -1.91
HDA1P53973 TFC4YGR047C 3078 nt3.13□□□□□ -1.91
HDA1P53973 YDL011CYDL011C 324 nt3.13□□□□□ -1.91
HDA1P53973 YDL041WYDL041W 354 nt3.13□□□□□ -1.91
HDA1P53973 DAD4YDR320C-A 219 nt3.13□□□□□ -1.91
HDA1P53973 YFL063WYFL063W 456 nt3.13□□□□□ -1.91
HDA1P53973 PRE4YFR050C 801 nt3.13□□□□□ -1.91
HDA1P53973 PSY1YKL076C 384 nt3.13□□□□□ -1.91
HDA1P53973 UTP30YKR060W 825 nt3.13□□□□□ -1.91
HDA1P53973 YBR085C-AYBR085C-A 258 nt3.13□□□□□ -1.91
HDA1P53973 BUB1YGR188C 3066 nt3.13□□□□□ -1.91
HDA1P53973 VPS64YDR200C 1815 nt3.12□□□□□ -1.91
HDA1P53973 YJL181WYJL181W 1836 nt3.12□□□□□ -1.91
HDA1P53973 RLF2YPR018W 1821 nt3.12□□□□□ -1.91
HDA1P53973 tM(CAU)Q1tM(CAU)Q1 76 nt3.12□□□□□ -1.91
HDA1P53973 YKL183C-AYKL183C-A 213 nt3.12□□□□□ -1.91
HDA1P53973 RPS18BYML026C 441 nt3.12□□□□□ -1.91
HDA1P53973 YNL337WYNL337W 255 nt3.12□□□□□ -1.91
HDA1P53973 YGR067CYGR067C 2415 nt3.12□□□□□ -1.91
HDA1P53973 YGR174W-AYGR174W-A 87 nt3.11□□□□□ -1.91
HDA1P53973 YHR007C-AYHR007C-A 216 nt3.11□□□□□ -1.91
HDA1P53973 YJL015CYJL015C 285 nt3.11□□□□□ -1.91
HDA1P53973 DLS1YJL065C 504 nt3.11□□□□□ -1.91
HDA1P53973 snR51snR51 107 nt3.11□□□□□ -1.91
HDA1P53973 ECM25YJL201W 1800 nt3.11□□□□□ -1.91
HDA1P53973 YIL166CYIL166C 1629 nt3.11□□□□□ -1.91
HDA1P53973 YPL150WYPL150W 2706 nt3.11□□□□□ -1.91
HDA1P53973 GYP7YDL234C 2241 nt3.11□□□□□ -1.91
HDA1P53973 RIX1YHR197W 2292 nt3.1□□□□□ -1.91
HDA1P53973 AI2Q0055 2565 nt3.1□□□□□ -1.91
HDA1P53973 POL2YNL262W 6669 nt3.1□□□□□ -1.91
HDA1P53973 SSE1YPL106C 2082 nt3.1□□□□□ -1.91
HDA1P53973 PSK2YOL045W 3306 nt3.1□□□□□ -1.91
HDA1P53973 snR79snR79 84 nt3.1□□□□□ -1.91
HDA1P53973 YKR033CYKR033C 426 nt3.1□□□□□ -1.91
HDA1P53973 YPL152W-AYPL152W-A 99 nt3.1□□□□□ -1.91
HDA1P53973 MGR1YCL044C 1254 nt3.1□□□□□ -1.91
HDA1P53973 PRK1YIL095W 2433 nt3.1□□□□□ -1.91
HDA1P53973 RKM1YPL208W 1752 nt3.1□□□□□ -1.91
HDA1P53973 APC2YLR127C 2562 nt3.09□□□□□ -1.91
HDA1P53973 SOK1YDR006C 2706 nt3.09□□□□□ -1.91
HDA1P53973 tW(CCA)G1tW(CCA)G1 72 nt3.09□□□□□ -1.91
HDA1P53973 tW(CCA)G2tW(CCA)G2 72 nt3.09□□□□□ -1.91
HDA1P53973 tW(CCA)JtW(CCA)J 72 nt3.09□□□□□ -1.91
HDA1P53973 tW(CCA)KtW(CCA)K 72 nt3.09□□□□□ -1.91
HDA1P53973 tW(CCA)MtW(CCA)M 72 nt3.09□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 48.7 ms