Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLCN4P51793 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.59■■□□□ 1.05
CLCN4P51793 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CLCN4P51793 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CLCN4P51793 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLCN4P51793 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.59■■□□□ 1.05
CLCN4P51793 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLCN4P51793 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLCN4P51793 AC006557.6-201ENST00000623071 864 ntBASIC21.59■■□□□ 1.05
CLCN4P51793 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLCN4P51793 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLCN4P51793 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.58■■□□□ 1.05
CLCN4P51793 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLCN4P51793 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLCN4P51793 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CLCN4P51793 AC239809.2-201ENST00000415381 517 ntBASIC21.58■■□□□ 1.05
CLCN4P51793 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CLCN4P51793 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CLCN4P51793 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.58■■□□□ 1.05
CLCN4P51793 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.58■■□□□ 1.05
CLCN4P51793 AL356652.1-201ENST00000615962 565 ntBASIC21.58■■□□□ 1.05
CLCN4P51793 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CLCN4P51793 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
CLCN4P51793 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CLCN4P51793 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
CLCN4P51793 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CLCN4P51793 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.57■■□□□ 1.04
CLCN4P51793 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLCN4P51793 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CLCN4P51793 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLCN4P51793 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLCN4P51793 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLCN4P51793 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CLCN4P51793 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.57■■□□□ 1.04
CLCN4P51793 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.57■■□□□ 1.04
CLCN4P51793 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.57■■□□□ 1.04
CLCN4P51793 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
CLCN4P51793 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.57■■□□□ 1.04
CLCN4P51793 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.57■■□□□ 1.04
CLCN4P51793 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLCN4P51793 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CLCN4P51793 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLCN4P51793 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
CLCN4P51793 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.56■■□□□ 1.04
CLCN4P51793 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLCN4P51793 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CLCN4P51793 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLCN4P51793 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLCN4P51793 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.56■■□□□ 1.04
CLCN4P51793 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.56■■□□□ 1.04
CLCN4P51793 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLCN4P51793 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLCN4P51793 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CLCN4P51793 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.56■■□□□ 1.04
CLCN4P51793 TSPY7P-201ENST00000431358 1114 ntBASIC21.56■■□□□ 1.04
CLCN4P51793 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLCN4P51793 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.56■■□□□ 1.04
CLCN4P51793 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.56■■□□□ 1.04
CLCN4P51793 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CLCN4P51793 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.56■■□□□ 1.04
CLCN4P51793 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
CLCN4P51793 AC110285.5-201ENST00000611501 352 ntBASIC21.56■■□□□ 1.04
CLCN4P51793 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CLCN4P51793 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
CLCN4P51793 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CLCN4P51793 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.56■■□□□ 1.04
CLCN4P51793 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.56■■□□□ 1.04
CLCN4P51793 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.56■■□□□ 1.04
CLCN4P51793 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLCN4P51793 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CLCN4P51793 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CLCN4P51793 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLCN4P51793 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
CLCN4P51793 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CLCN4P51793 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLCN4P51793 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CLCN4P51793 BX088651.1-201ENST00000540551 451 ntBASIC21.55■■□□□ 1.04
CLCN4P51793 AL049637.2-201ENST00000641778 930 ntBASIC21.55■■□□□ 1.04
CLCN4P51793 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CLCN4P51793 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.55■■□□□ 1.04
CLCN4P51793 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLCN4P51793 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CLCN4P51793 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.55■■□□□ 1.04
CLCN4P51793 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CLCN4P51793 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLCN4P51793 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CLCN4P51793 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CLCN4P51793 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.55■■□□□ 1.04
CLCN4P51793 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLCN4P51793 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.54■■□□□ 1.04
CLCN4P51793 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.54■■□□□ 1.04
CLCN4P51793 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLCN4P51793 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CLCN4P51793 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLCN4P51793 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CLCN4P51793 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CLCN4P51793 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLCN4P51793 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.54■■□□□ 1.04
CLCN4P51793 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CLCN4P51793 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms