Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF144AP50876 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF144AP50876 AC091799.1-201ENST00000422823 811 ntBASIC18.94■□□□□ 0.62
RNF144AP50876 MFSD11-216ENST00000590393 1141 ntBASIC18.94■□□□□ 0.62
RNF144AP50876 AC022517.1-201ENST00000592429 346 ntBASIC18.94■□□□□ 0.62
RNF144AP50876 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
RNF144AP50876 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
RNF144AP50876 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RNF144AP50876 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF144AP50876 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
RNF144AP50876 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF144AP50876 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF144AP50876 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF144AP50876 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF144AP50876 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF144AP50876 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF144AP50876 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF144AP50876 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF144AP50876 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF144AP50876 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF144AP50876 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF144AP50876 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF144AP50876 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF144AP50876 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF144AP50876 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RNF144AP50876 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF144AP50876 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF144AP50876 AC010536.3-201ENST00000620306 533 ntBASIC18.93■□□□□ 0.62
RNF144AP50876 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF144AP50876 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF144AP50876 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF144AP50876 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF144AP50876 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF144AP50876 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF144AP50876 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF144AP50876 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF144AP50876 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.92■□□□□ 0.62
RNF144AP50876 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF144AP50876 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF144AP50876 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF144AP50876 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF144AP50876 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF144AP50876 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF144AP50876 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF144AP50876 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF144AP50876 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RNF144AP50876 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RNF144AP50876 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
RNF144AP50876 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RNF144AP50876 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF144AP50876 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF144AP50876 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF144AP50876 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF144AP50876 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF144AP50876 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
RNF144AP50876 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF144AP50876 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF144AP50876 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.91■□□□□ 0.62
RNF144AP50876 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.91■□□□□ 0.62
RNF144AP50876 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF144AP50876 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF144AP50876 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
RNF144AP50876 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF144AP50876 AC116050.2-201ENST00000612102 1779 ntBASIC18.91■□□□□ 0.62
RNF144AP50876 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF144AP50876 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RNF144AP50876 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF144AP50876 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RNF144AP50876 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF144AP50876 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF144AP50876 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
RNF144AP50876 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
RNF144AP50876 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RNF144AP50876 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RNF144AP50876 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF144AP50876 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF144AP50876 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF144AP50876 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF144AP50876 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RNF144AP50876 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.89■□□□□ 0.62
RNF144AP50876 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
RNF144AP50876 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RNF144AP50876 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RNF144AP50876 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF144AP50876 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF144AP50876 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF144AP50876 TERF1P5-201ENST00000477545 1207 ntBASIC18.89■□□□□ 0.61
RNF144AP50876 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RNF144AP50876 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF144AP50876 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF144AP50876 AC092437.1-201ENST00000624794 1048 ntBASIC18.89■□□□□ 0.61
RNF144AP50876 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RNF144AP50876 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF144AP50876 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RNF144AP50876 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF144AP50876 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF144AP50876 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF144AP50876 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RNF144AP50876 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF144AP50876 AC112907.3-201ENST00000577781 2400 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms